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WormBase Tree Display for Gene: WBGene00004862

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Name Class

WBGene00004862EvidencePaper_evidenceWBPaper00013343
SMapS_parentSequenceT05A10
IdentityVersion1
NameCGC_namesma-9Person_evidenceWBPerson261
Sequence_nameT05A10.1
Molecular_name (38)
Other_nameCELE_T05A10.1Accession_evidenceNDBBX284606
Public_namesma-9
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:36WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_info (11)
Disease_infoExperimental_modelDOID:10652Homo sapiensPaper_evidenceWBPaper00046027
Curator_confirmedWBPerson324
Date_last_updated21 Sep 2018 00:00:00
Potential_modelDOID:0070073Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:4921)
Models_disease_in_annotationWBDOannot00000341
Molecular_infoCorresponding_CDS (11)
Corresponding_CDS_history (13)
Corresponding_transcript (16)
Other_sequence (328)
Associated_feature (25)
Gene_product_binds (41)
Transcription_factorWBTranscriptionFactor000847
Experimental_infoRNAi_result (21)
Expr_patternExpr2782
Expr2783
Expr3995
Expr10436
Expr1011744
Expr1032413
Expr1156052
Expr1200018
Expr2015897
Expr2034130
Drives_construct (15)
Construct_product (11)
AntibodyWBAntibody00000885
Microarray_results (83)
Expression_clusterWBPaper00028867:HLH-1_induced_TF
WBPaper00032976:dosage_compensated_genes
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037055:DAF-16_binding_DNA
WBPaper00037682:sma-2_sma-4_upregulated
WBPaper00037946:EGL-5_interacting
WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
WBPaper00040209:B.thuringiensis_upregulated_MY18
WBPaper00040221:DAF-12_target_ALF4
WBPaper00040285:H2S_12hr_downregulated
WBPaper00042215:wdr-23(tm1817)_upregulated
WBPaper00044736:flat_dev_expression
WBPaper00044743:wdr-23_neuron_upregulated
WBPaper00045314:S.aureus-induced_N2
WBPaper00045316:prg-1_upregulated_L1
WBPaper00045316:prg-1_upregulated_L2
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045521:Oogenic
WBPaper00045974:NSM_enriched_DSN-treated_RNAseq
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00046741:Garlic-Extract_upregulated_mRNA
WBPaper00046805:csr-1(RNAi)_downregulated_Set1
WBPaper00048988:neuron_enriched
WBPaper00048988:neuron_expressed
WBPaper00049217:DAF-16_upregulated
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
WBPaper00049920:Glucose-Diet_downregulated_hyl-2(tm2031)
WBPaper00049942:HeatShock_downregulated_hsf-1(+)
WBPaper00050015:ifg-1(RNAi)_upregulated
WBPaper00050234:lin-28(RNAi)_upregulated
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:daf-2(e1370)_vs_daf-2(e1370);mir-34(gk437)_regulated_dauer_25C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:body-muscle_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:pharynx_expressed
WBPaper00050990:seam_expressed
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00053023:nlg-1(ok259)_upregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053295:lin-22(icb38)_upregulated
WBPaper00053321:lin-15B(RNAi)_downregulated_starved-L1_Truseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_L1_SMARTseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_starved-L1_Truseq
WBPaper00053321:PGCs_depleted_NuGen
WBPaper00053599:mitosis_vs_meiosis_downregulated
WBPaper00053599:oocyte_vs_mitosis_downregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00055060:flr-1(RNAi)_upregulated
WBPaper00055334:DLC-1_interacting
WBPaper00055344:hypoxia_regulated_HIF-1_independent
WBPaper00055482:pmt-2(RNAi)_upregulated
WBPaper00055897:heat-shock_downregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056161:hermaphrodite_enriched_siRNA
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056471:S.aureus-4h_upregulated_N2
WBPaper00056826:hmc_biased
WBPaper00056868:P.aeruginosa_upregulated_smallRNA
WBPaper00057041:unc-70(cas983)_downregulated
WBPaper00057288:iff-1(RNAi)_downregulated_transcript
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058691:WDR-5.1_interacting_protein
WBPaper00058725:sftb-1(cer6)_downregulated
WBPaper00058725:sftb-1(cer39)_downregulated
WBPaper00058948:PA14_downregulated
WBPaper00059027:neuron-synapses_depleted
WBPaper00059356:BAZ-2_SET-6_interacting
WBPaper00059471:EGL-43_interacting
WBPaper00059567:olrn-1(ums9)_regulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061340:G2_and_W_blasts
WBPaper00061439:unc-30(ok613)_downregulated
WBPaper00061478:SUMO-conjugated_protein
WBPaper00061479:HDA-1_interacting_protein
WBPaper00061527:chd-7_16664-jmjd-3.1
WBPaper00061527:ldb-1_2877-scd-1_3086
WBPaper00062103:neuron_enriched
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:skn-1(RNAi)_downregulated
WBPaper00064005:starvation_upregulated_aptf-1(gk794)_mRNA
WBPaper00064005:starvation_upregulated_N2_mRNA
WBPaper00064055:trl-1(cas1077)_upregulated_non-starved
WBPaper00064055:trl-1(cas1077)_upregulated_starved
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064122:vulva_transcriptome
WBPaper00064156:lbp-3(overexpress)_upregulated
WBPaper00064315:mes-3(bn199)_upregulated_EGCs
WBPaper00064315:mes-4(bn73)_upregulated_EGCs
WBPaper00064315:mrg-1(qa6200)_upregulated_PGCs
WBPaper00064716:paraquat_downregulated
WBPaper00064939:vit-5(RNAi)_upregulated
WBPaper00065120:body-muscle-transcriptome
WBPaper00065199:Transgeneration-starvation_regulated_fed
WBPaper00066062:xrep-4(lax137)_upregulated
cgc4386_cluster_6_5
cgc4489_group_15
cgc4489_group_20
WBPaper00024671:AFD_AWB_vs_unsorted_upregulated
WBPaper00025032:cluster_10
WBPaper00025032:cluster_12
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00029437:dcr-1_upregulated
WBPaper00031003:hlh_1_enriched
WBPaper00031532:Larva_Pan_Neuronal_Enriched
WBPaper00031832:slr-2_regulated
WBPaper00032948:StarveUp2
WBPaper00034661:AgNPs_downregulated
WBPaper00035227:heat_shock_regulated
WBPaper00035588:alg-1(-)_upregulated
WBPaper00037113:CPF_DZN_16C_up-regulated
WBPaper00038060:SUMO-1_downregulated
WBPaper00040823:alg-1(gk214)_downregulated
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_developing
WBPaper00040858:eQTL_regulated_juvenile
WBPaper00040858:eQTL_regulated_old
WBPaper00040963:Q100_down
WBPaper00040963:Q200_down
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00041960:N2_fasting_upregulated_anytime
WBPaper00045865:biofilm_upregulated_A
WBPaper00045960:L4-lethargus_upregulated
WBPaper00047070:N2_starvation_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00048989:N2_allantoin_downregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
WBPaper00055899:nitroguanidine_regulated
WBPaper00057098:SiO2-nanoparticles_upregulated
[cgc5767]:expression_class_E
[cgc5767]:expression_class_E_pi(122_min)
[cgc5767]:expression_class_SE
[cgc5767]:expression_class_SE_pi(122_min)
[cgc6390]:male_soma-enriched
Interaction (82)
WBProcessWBbiopr:00000025
WBbiopr:00000026
WBbiopr:00000033
Map_infoMapXPosition2.51785Error0.028298
PositiveInside_rearrnDf19
yDp9
Positive_cloneT05A10Inferred_automaticallyFrom sequence, transcript, pseudogene data
NegativeOutside_rearrmnDp1
mnDf1
yDp5
Mapping_data2_point7096
7097
7099
Pos_neg_data10243
10244
10245
10246
10247
Reference (61)
PictureWBPicture0000013077
MethodGene