WormBase Tree Display for Gene: WBGene00004345
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WBGene00004345 | SMap | S_parent | Sequence | CHROMOSOME_X | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | rgs | ||||||
Allele (258) | |||||||
Strain | WBStrain00026362 | ||||||
WBStrain00026360 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00011399 | ||||||
00047258 | |||||||
Ortholog (47) | |||||||
Paralog | WBGene00004344 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00004346 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00004347 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00004354 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00004353 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00004350 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00001145 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00001179 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00004349 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Concise_description | rgs-2 encodes a regulator of G protein signaling; by homology, RGS-2 is predicted to function as a GTPase-activating protein for heterotrimeric G-protein alpha-subunits, and in vitro RGS-2 can stimulate the GTPase activity of purified GOA-1; in vivo, rgs-2 appears to function redundantly with rgs-1 to regulate egg-laying behavior when animals are refed following starvation; rgs-2 is expressed in pharyngeal and uterine muscles and in a subset of neurons, including neurons in the ventral cord and head- and tail-ganglia. | Paper_evidence | WBPaper00004281 | |||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Enables GTPase activator activity. Predicted to be involved in negative regulation of signal transduction. Expressed in head neurons; pharyngeal muscle cell; tail neurons; uterine muscle; and ventral cord neurons. Is an ortholog of human RGS19 (regulator of G protein signaling 19). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F16H9.1a | |||||
F16H9.1b | |||||||
F16H9.1c | |||||||
F16H9.1d | |||||||
Corresponding_transcript | F16H9.1a.1 | ||||||
F16H9.1b.1 | |||||||
F16H9.1c.1 | |||||||
F16H9.1d.1 | |||||||
Other_sequence (40) | |||||||
Associated_feature (22) | |||||||
Experimental_info | RNAi_result | WBRNAi00112305 | Inferred_automatically | RNAi_primary | |||
WBRNAi00044841 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00013436 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00031054 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00112304 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00112307 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00112306 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00112303 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00112308 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00112309 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1049 | ||||||
Expr11589 | |||||||
Expr1019382 | |||||||
Expr1032163 | |||||||
Expr1148805 | |||||||
Expr2015325 | |||||||
Expr2033559 | |||||||
Drives_construct | WBCnstr00000298 | ||||||
WBCnstr00004866 | |||||||
WBCnstr00008978 | |||||||
WBCnstr00010049 | |||||||
WBCnstr00035551 | |||||||
Construct_product | WBCnstr00004866 | ||||||
WBCnstr00010049 | |||||||
WBCnstr00035551 | |||||||
Antibody | WBAntibody00001586 | ||||||
Microarray_results (34) | |||||||
Expression_cluster (158) | |||||||
Interaction (33) | |||||||
Map_info | Map | X | Position | 8.11575 | Error | 0.023369 | |
Positive | Positive_clone | F16H9 | Inferred_automatically | From CDS info | |||
From sequence, transcript, pseudogene data | |||||||
Mapping_data | Multi_point | 4581 | |||||
4634 | |||||||
5420 | |||||||
Pseudo_map_position | |||||||
Reference (17) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |