WormBase Tree Display for Gene: WBGene00001145
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| WBGene00001145 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C16C2 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | eat-16 | Person_evidence | WBPerson32 | |||||
| Sequence_name | C16C2.2 | ||||||||
| Molecular_name | C16C2.2a | ||||||||
| C16C2.2a.1 | |||||||||
| CE17404 | |||||||||
| C16C2.2b | |||||||||
| CE30491 | |||||||||
| C16C2.2b.1 | |||||||||
| Other_name | sag-2 | ||||||||
| CELE_C16C2.2 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | eat-16 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:23 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | eat | ||||||||
| Allele (53) | |||||||||
| Legacy_information | [Leon Avery] Strong Eat: slippery isthmus and corpus. | ||||||||
| See also ad702 | |||||||||
| [C.elegansII] ad702 : strong Eat: slippery isthmus and corpus. [Avery 1993; DA] | |||||||||
| Strain | WBStrain00022805 | ||||||||
| WBStrain00023483 | |||||||||
| WBStrain00026411 | |||||||||
| WBStrain00004787 | |||||||||
| WBStrain00005505 | |||||||||
| WBStrain00022017 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (27) | |||||||||
| Ortholog (38) | |||||||||
| Paralog | WBGene00001179 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00004344 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00004345 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00004347 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00004349 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00004350 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | The eat-16 gene encodes an RGS protein that affects movement, pharyngeal pumping, egg laying, and synaptic transmission; it genetically interacts with the egl-30 and goa-1 signaling pathways, and is expressed in excitable cells and in the spermatheca. | Paper_evidence | WBPaper00004713 | |||||
| WBPaper00004721 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enables GTPase activator activity. Involved in several processes, including phospholipase C-inhibiting G protein-coupled receptor signaling pathway; regulation of cell communication; and response to monoamine. Located in cytoplasm; neuron projection; and plasma membrane. Expressed in HSNL; HSNR; neurons; pharyngeal muscle cell; and vulval muscle. Human ortholog(s) of this gene implicated in bradyopsia 1. Is an ortholog of human RGS9 (regulator of G protein signaling 9). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0070363 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10004) | ||||
| Molecular_info | Corresponding_CDS | C16C2.2a | |||||||
| C16C2.2b | |||||||||
| Corresponding_CDS_history | C16C2.2:wp77 | ||||||||
| Corresponding_transcript | C16C2.2a.1 | ||||||||
| C16C2.2b.1 | |||||||||
| Other_sequence (34) | |||||||||
| Associated_feature | WBsf643615 | ||||||||
| WBsf655796 | |||||||||
| WBsf656787 | |||||||||
| WBsf218329 | |||||||||
| WBsf218330 | |||||||||
| WBsf218331 | |||||||||
| Experimental_info | RNAi_result (16) | ||||||||
| Expr_pattern | Expr1333 | ||||||||
| Expr8085 | |||||||||
| Expr8866 | |||||||||
| Expr8867 | |||||||||
| Expr1022292 | |||||||||
| Expr1030727 | |||||||||
| Expr1144733 | |||||||||
| Expr2011152 | |||||||||
| Expr2029388 | |||||||||
| Drives_construct | WBCnstr00004867 | ||||||||
| WBCnstr00005925 | |||||||||
| WBCnstr00010225 | |||||||||
| WBCnstr00013101 | |||||||||
| Construct_product | WBCnstr00004867 | ||||||||
| WBCnstr00005925 | |||||||||
| WBCnstr00010225 | |||||||||
| WBCnstr00013101 | |||||||||
| Antibody | WBAntibody00002110 | ||||||||
| Microarray_results (33) | |||||||||
| Expression_cluster (105) | |||||||||
| Interaction (54) | |||||||||
| Anatomy_function | WBbtf0195 | ||||||||
| WBbtf0990 | |||||||||
| Map_info | Map | I | Position | 3.86852 | Error | 0.003422 | |||
| Well_ordered | |||||||||
| Positive | Positive_clone | C16C2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 2469 | |||||||
| 2470 | |||||||||
| 4866 | |||||||||
| 4836 | |||||||||
| Landmark_gene | |||||||||
| Reference (94) | |||||||||
| Remark | Interacting_genes '[Leon Avery] unc-31: Partially suppresses the Unc phenotype of unc-31. | ||||||||
| Sequence From: paul sternberg via ACEDB feedback page <pws@caltech.edu> | |||||||||
| Sequence connection from [Hadju-Cronin YM, Sternberg PS] | |||||||||
| old_name sag-2 becomes new_name eat-16 from [Hadju-Cronin Y, Sternberg PW]. | |||||||||
| Method | Gene |
