WormBase Tree Display for CDS: C16C2.2a
expand all nodes | collapse all nodes | view schema
| C16C2.2a | Evidence | Inferred_automatically | make_isoforms.pl | ||
|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C16C2 | ||
| Structure | Source_exons | 1 | 21 | ||
| 72 | 191 | ||||
| 302 | 385 | ||||
| 450 | 543 | ||||
| 588 | 666 | ||||
| 1044 | 1340 | ||||
| 1478 | 1591 | ||||
| 1639 | 2149 | ||||
| 2196 | 2281 | ||||
| 2599 | 2614 | ||||
| DB_info | Database | TrEMBL | UniProtAcc | O17589 | |
| UniProt | UniProtAcc | O17589 | |||
| UniProt_GCRP | UniProtAcc | O17589 | |||
| AlphaFold | entry | O17589 | |||
| NCBI_protein | GI_number | GI:3874362 | |||
| TREEFAM | TREEFAM_ID | TF351956 | |||
| Protein_id | CHROMOSOME_I | CAB02742 | 1 | ||
| DB_remark | EAT-16 protein; contains similarity to Pfam domains PF00610 (Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)), PF00615 (Regulator of G protein signaling domain), PF00631 (GGL domain), PF18148 (Regulator of G-protein signalling DHEX domain); contains similarity to Interpro domains IPR040759 (Regulator of G-protein signalling, DHEX domain), IPR036305 (RGS domain superfamily), IPR044926 (RGS, subdomain 2), IPR047017 (Regulator of G-protein signalling 6/7/9/11, DHEX domain superfamily), IPR036390 (Winged helix DNA-binding domain superfamily), IPR036388 (Winged helix-like DNA-binding domain superfamily), IPR047016 (Regulator of G protein signaling 6/7/9/11), IPR016137 (RGS domain), IPR036284 (G-protein gamma-like domain superfamily), IPR015898 (G-protein gamma-like domain), IPR000591 (DEP domain) | ||||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Properties | Coding | CDS | |||
| Prediction_status | Confirmed | ||||
| Isoform | Accession_evidence | NDB | CB407132 | ||
| Inferred_automatically | transcript_builder | ||||
| Visible (11) | |||||
| Associated_feature | WBsf002008 | ||||
| Method | curated |
