WormBase Tree Display for Gene: WBGene00004344
expand all nodes | collapse all nodes | view schema
WBGene00004344 | SMap | S_parent | Sequence | C05B5 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | rgs-1 | Person_evidence | WBPerson330 | |||||
Sequence_name | C05B5.7 | ||||||||
Molecular_name | C05B5.7a | ||||||||
C05B5.7a.1 | |||||||||
CE27794 | |||||||||
C05B5.7b | |||||||||
CE44351 | |||||||||
C05B5.7a.2 | |||||||||
C05B5.7b.1 | |||||||||
Other_name | CELE_C05B5.7 | Accession_evidence | NDB | BX284603 | |||||
Public_name | rgs-1 | ||||||||
DB_info | Database | AceView | gene | 3L104 | |||||
WormQTL | gene | WBGene00004344 | |||||||
WormFlux | gene | WBGene00004344 | |||||||
NDB | locus_tag | CELE_C05B5.7 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00004344|UniProtKB=P34295 | |||||||
family | PTHR10845 | ||||||||
NCBI | gene | 176415 | |||||||
RefSeq | protein | NM_001268127.3 | |||||||
NM_001382973.1 | |||||||||
SwissProt | UniProtAcc | P34295 | |||||||
TrEMBL | UniProtAcc | D1MN65 | |||||||
UniProt_GCRP | UniProtAcc | P34295 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:35 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | rgs | ||||||||
Allele (51) | |||||||||
Strain | WBStrain00002110 | ||||||||
WBStrain00002015 | |||||||||
WBStrain00026359 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00007268 | ||||||||
00041408 | |||||||||
00041409 | |||||||||
00041410 | |||||||||
00041411 | |||||||||
00041412 | |||||||||
00041413 | |||||||||
00041414 | |||||||||
Ortholog (40) | |||||||||
Paralog (12) | |||||||||
Structured_description | Concise_description | rgs-1 encodes a regulator of G protein signaling; by homology, RGS-1 is predicted to function as a GTPase-activating protein for heterotrimeric G-protein alpha-subunits, and in vitro RGS-1 can stimulate the GTPase activity of purified GOA-1; in vivo, rgs-1 appears to function redundantly with rgs-2 to regulate egg-laying behavior when animals are refed following starvation; rgs-1 is expressed in most or all neurons. | Paper_evidence | WBPaper00004281 | |||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Enables GTPase activator activity. Involved in chemosensory behavior and sensory perception of bitter taste. Expressed in head; neurons; and tail. Is an ortholog of human RGS19 (regulator of G protein signaling 19). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C05B5.7a | |||||||
C05B5.7b | |||||||||
Corresponding_CDS_history | C05B5.7:wp52 | ||||||||
Corresponding_transcript | C05B5.7a.1 | ||||||||
C05B5.7a.2 | |||||||||
C05B5.7b.1 | |||||||||
Other_sequence | AF220159 | ||||||||
FG347523.1 | |||||||||
HBC08155_1 | |||||||||
Hbac_isotig02240 | |||||||||
DN152756.1 | |||||||||
FG619603.1 | |||||||||
FG619770.1 | |||||||||
EE724204.1 | |||||||||
JI476597.1 | |||||||||
Associated_feature | WBsf651432 | ||||||||
WBsf993883 | |||||||||
WBsf993884 | |||||||||
WBsf993885 | |||||||||
WBsf1015718 | |||||||||
WBsf1015719 | |||||||||
Experimental_info | RNAi_result | WBRNAi00010174 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00039692 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00006271 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern (11) | |||||||||
Drives_construct | WBCnstr00002798 | ||||||||
WBCnstr00004421 | |||||||||
WBCnstr00004865 | |||||||||
WBCnstr00010048 | |||||||||
WBCnstr00020145 | |||||||||
Construct_product | WBCnstr00004865 | ||||||||
WBCnstr00010048 | |||||||||
Antibody | WBAntibody00001585 | ||||||||
Microarray_results (21) | |||||||||
Expression_cluster (160) | |||||||||
Interaction (20) | |||||||||
Map_info | Map | III | Position | 1.53481 | Error | 0.012126 | |||
Positive | Positive_clone | C05B5 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Mapping_data | Multi_point | 4633 | |||||||
5300 | |||||||||
Pseudo_map_position | |||||||||
Reference (14) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |