WormBase Tree Display for Gene: WBGene00004344

WBGene00004344 SMap: S_parent: Sequence: C05B5
  Identity: Version: 1
    Name: CGC_name: rgs-1 Person_evidence: WBPerson330
      Sequence_name: C05B5.7
      Molecular_name: C05B5.7a
        C05B5.7a.1
        CE27794
        C05B5.7b
        CE44351
        C05B5.7a.2
        C05B5.7b.1
      Other_name: CELE_C05B5.7 Accession_evidence: NDB BX284603
      Public_name: rgs-1
    DB_info: Database: AceView gene 3L104
        WormQTL gene WBGene00004344
        WormFlux gene WBGene00004344
        NDB locus_tag CELE_C05B5.7
        Panther gene CAEEL|WormBase=WBGene00004344|UniProtKB=P34295
          family PTHR10845
        NCBI gene 176415
        RefSeq protein NM_001268127.3
            NM_001382973.1
        SwissProt UniProtAcc P34295
        TrEMBL UniProtAcc D1MN65
        UniProt_GCRP UniProtAcc P34295
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:35 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rgs
    Allele (51)
    Strain: WBStrain00002110
      WBStrain00002015
      WBStrain00026359
    RNASeq_FPKM (74)
    GO_annotation: 00007268
      00041408
      00041409
      00041410
      00041411
      00041412
      00041413
      00041414
    Ortholog: WBGene00031423 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00142203 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00085237 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00119705 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00072351 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00089852 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00268808 Brugia malayi From_analysis: WormBase-Compara
      CSP26.g14047 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g19376 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP28.g19836 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g14845 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP32.g6429 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP39.g28312 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g28463 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g4608 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g8024 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cnig_chr_III.g10662 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g10258 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01073.g18162 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_18334 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_009567 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g05551 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g20730 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30206120 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g8768 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00238275 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00259236 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00291359 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0028743 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040718-128 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-080723-72 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:14600 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            PhylomeDB
            SonicParanoid
      HGNC:13735 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:14088 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            PhylomeDB
            SonicParanoid
      MGI:1915153 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1927469 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            PhylomeDB
            SonicParanoid
      MGI:1929866 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            PhylomeDB
            SonicParanoid
      RGD:629471 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1305515 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            PhylomeDB
            SonicParanoid
      RGD:1586146 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            PhylomeDB
            SonicParanoid
    Paralog (12)
    Structured_description: Concise_description: rgs-1 encodes a regulator of G protein signaling; by homology, RGS-1 is predicted to function as a GTPase-activating protein for heterotrimeric G-protein alpha-subunits, and in vitro RGS-1 can stimulate the GTPase activity of purified GOA-1; in vivo, rgs-1 appears to function redundantly with rgs-2 to regulate egg-laying behavior when animals are refed following starvation; rgs-1 is expressed in most or all neurons. Paper_evidence: WBPaper00004281
          Curator_confirmed: WBPerson1843
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enables GTPase activator activity. Involved in chemosensory behavior and sensory perception of bitter taste. Expressed in head; neurons; and tail. Is an ortholog of human RGS19 (regulator of G protein signaling 19). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C05B5.7a
      C05B5.7b
    Corresponding_CDS_history: C05B5.7:wp52
    Corresponding_transcript: C05B5.7a.1
      C05B5.7a.2
      C05B5.7b.1
    Other_sequence: AF220159
      FG347523.1
      HBC08155_1
      Hbac_isotig02240
      DN152756.1
      FG619603.1
      FG619770.1
      EE724204.1
      JI476597.1
    Associated_feature: WBsf651432
      WBsf993883
      WBsf993884
      WBsf993885
      WBsf1015718
      WBsf1015719
  Experimental_info: RNAi_result: WBRNAi00010174 Inferred_automatically: RNAi_primary
      WBRNAi00039692 Inferred_automatically: RNAi_primary
      WBRNAi00006271 Inferred_automatically: RNAi_primary
    Expr_pattern (11)
    Drives_construct: WBCnstr00002798
      WBCnstr00004421
      WBCnstr00004865
      WBCnstr00010048
      WBCnstr00020145
    Construct_product: WBCnstr00004865
      WBCnstr00010048
    Antibody: WBAntibody00001585
    Microarray_results (21)
    Expression_cluster (160)
    Interaction (20)
  Map_info: Map: III Position: 1.53481 Error: 0.012126
    Positive: Positive_clone: C05B5 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4633
        5300
    Pseudo_map_position
  Reference (14)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene