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WormBase Tree Display for Gene: WBGene00085237

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Name Class

WBGene00085237SMapS_parentSequenceCrem_Contig7
IdentityVersion2
NameCGC_nameCre-rgs-1From_analysisInferred_from_orthology
Sequence_nameCRE25227
Molecular_nameCRE25227
CRE25227.1
RP32667
Public_nameCre-rgs-1
SpeciesCaenorhabditis remanei
HistoryVersion_change103 Jul 2008 11:46:54WBPerson4055EventCreated
204 Jul 2008 11:06:47WBPerson4055Name_changeCGC_nameCre-rgs-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrgs
RNASeq_FPKMWBls:00000040.588129From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
1.71914From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
2.85014From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (52)
WBls:000002710.4611From_analysisRNASeq.remanei.WBls:0000027.control_median
13.5728From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
17.2268From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
1.74129From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
7.34943From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
9.97258From_analysisRNASeq.remanei.WBls:0000027.control_mean
WBls:00000381.7632From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
5.21218From_analysisRNASeq.remanei.WBls:0000038.control_mean
6.70851From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
7.16483From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
WBls:00000411.66059From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
1.74536From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
2.40904From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
3.98734From_analysisRNASeq.remanei.WBls:0000041.control_median
4.29755From_analysisRNASeq.remanei.WBls:0000041.control_mean
5.56564From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
6.54881From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
7.85584From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:0000063 (11)
WBls:00001013.8247From_analysisRNASeq.remanei.total_over_all_stages.control_median
4.73685From_analysisRNASeq.remanei.total_over_all_stages.control_mean
Ortholog (27)
ParalogWBGene00051158Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00051966Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00059606Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00068120Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00072351Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00051629Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00052543Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00079878Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: RGS, subdomain 1/3; RGS domain; RGS domain superfamily; and Regulator of G protein signaling domain. Is an ortholog of C. elegans rgs-1. In C. elegans, rgs-1 is involved in chemosensory behavior and sensory perception of bitter taste.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE25227
Corresponding_transcriptCRE25227.1
Other_sequenceMH05235
MCC03486_1
MC01937
JI182595.1
MHC01780_1
JI476597.1
Experimental_infoExpr_patternExpr1096872
Microarray_resultsGPL14146_CRE25227_390-449_0.931_4_A
MethodGene