WormBase Tree Display for Gene: WBGene00004346
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| WBGene00004346 | SMap | S_parent | Sequence | CHROMOSOME_II | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | rgs-3 | Person_evidence | WBPerson330 | |||||
| Sequence_name | C29H12.3 | ||||||||
| Molecular_name (13) | |||||||||
| Other_name | CELE_C29H12.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | rgs-3 | ||||||||
| DB_info | Database | AceView | gene | 2G399 | |||||
| WormQTL | gene | WBGene00004346 | |||||||
| WormFlux | gene | WBGene00004346 | |||||||
| NDB | locus_tag | CELE_C29H12.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00004346|UniProtKB=Q18312 | |||||||
| family | PTHR10845 | ||||||||
| NCBI | gene | 174020 | |||||||
| RefSeq | protein | NM_062822.4 | |||||||
| NM_001393090.1 | |||||||||
| NM_182096.6 | |||||||||
| SwissProt | UniProtAcc | Q18312 | |||||||
| TrEMBL | UniProtAcc | Q5DX43 | |||||||
| Q8MQB2 | |||||||||
| UniProt_GCRP | UniProtAcc | Q18312 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:35 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rgs | ||||||||
| Allele (114) | |||||||||
| Strain | WBStrain00026361 | ||||||||
| WBStrain00032471 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00060895 | ||||||||
| 00060896 | |||||||||
| 00060897 | |||||||||
| 00060898 | |||||||||
| 00060899 | |||||||||
| 00060900 | |||||||||
| 00060901 | |||||||||
| Ortholog (28) | |||||||||
| Paralog | WBGene00004344 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00004345 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00004350 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00004347 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00004354 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00004353 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Concise_description | rgs-3 encodes three proteins containing two RGS (regulator of G protein signaling) domains, the more C-terminal of which is most similar to those of the mammalian brain-specific RGS, RGS8; rgs-3 activity is required for normal G protein-mediated response to a number of sensory stimuli, including odorants, high osmolarity, and nose touch off food; genetic analyses indicate that RGS-3 functions to decrease G protein signaling in sensory neurons and increase glutamatergic synaptic transmission from sensory to interneurons; RGS-3::GFP fusion proteins are expressed exclusively in nine pairs of sensory neurons from late stages of embryogenesis through adulthood. | Paper_evidence | WBPaper00028963 | |||||
| Curator_confirmed | WBPerson48 | ||||||||
| WBPerson1843 | |||||||||
| Date_last_updated | 24 Apr 2007 00:00:00 | ||||||||
| Automated_description | Involved in chemosensory behavior and sensory perception of bitter taste. Expressed in amphid neurons and phasmid neurons. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C29H12.3a | |||||||
| C29H12.3b | |||||||||
| C29H12.3c | |||||||||
| Corresponding_transcript | C29H12.3a.1 | ||||||||
| C29H12.3a.2 | |||||||||
| C29H12.3b.1 | |||||||||
| C29H12.3b.2 | |||||||||
| C29H12.3c.1 | |||||||||
| C29H12.3c.2 | |||||||||
| C29H12.3c.3 | |||||||||
| Other_sequence (24) | |||||||||
| Associated_feature (13) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00011368 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00000844 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041511 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029341 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00065514 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr2043 | ||||||||
| Expr4511 | |||||||||
| Expr1024036 | |||||||||
| Expr1032164 | |||||||||
| Expr1145535 | |||||||||
| Expr2015326 | |||||||||
| Expr2033560 | |||||||||
| Drives_construct | WBCnstr00012069 | ||||||||
| WBCnstr00035550 | |||||||||
| Construct_product | WBCnstr00007781 | ||||||||
| WBCnstr00012069 | |||||||||
| WBCnstr00035550 | |||||||||
| Microarray_results (35) | |||||||||
| Expression_cluster (131) | |||||||||
| Interaction | WBInteraction000361960 | ||||||||
| WBInteraction000368226 | |||||||||
| WBInteraction000418318 | |||||||||
| WBInteraction000423849 | |||||||||
| WBInteraction000569525 | |||||||||
| WBInteraction000569527 | |||||||||
| Map_info | Map | II | Position | -0.485213 | Error | 0.010992 | |||
| Positive | Positive_clone | C29H12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4907 | |||||||
| 4305 | |||||||||
| 5045 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (15) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
