WormBase Tree Display for Gene: WBGene00004345
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| WBGene00004345 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | rgs-2 | Person_evidence | WBPerson330 | |||||
| Sequence_name | F16H9.1 | ||||||||
| Molecular_name (12) | |||||||||
| Other_name | CELE_F16H9.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | rgs-2 | ||||||||
| DB_info | Database (10) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:35 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rgs | ||||||||
| Allele (258) | |||||||||
| Strain | WBStrain00026362 | ||||||||
| WBStrain00026360 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00011399 | ||||||||
| 00047258 | |||||||||
| Ortholog (47) | |||||||||
| Paralog | WBGene00004344 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00004346 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00004347 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00004354 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00004353 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00004350 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00001145 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00001179 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00004349 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | rgs-2 encodes a regulator of G protein signaling; by homology, RGS-2 is predicted to function as a GTPase-activating protein for heterotrimeric G-protein alpha-subunits, and in vitro RGS-2 can stimulate the GTPase activity of purified GOA-1; in vivo, rgs-2 appears to function redundantly with rgs-1 to regulate egg-laying behavior when animals are refed following starvation; rgs-2 is expressed in pharyngeal and uterine muscles and in a subset of neurons, including neurons in the ventral cord and head- and tail-ganglia. | Paper_evidence | WBPaper00004281 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enables GTPase activator activity. Predicted to be involved in negative regulation of signal transduction. Expressed in head neurons; pharyngeal muscle cell; tail neurons; uterine muscle; and ventral cord neurons. Is an ortholog of human RGS19 (regulator of G protein signaling 19). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F16H9.1a | |||||||
| F16H9.1b | |||||||||
| F16H9.1c | |||||||||
| F16H9.1d | |||||||||
| Corresponding_transcript | F16H9.1a.1 | ||||||||
| F16H9.1b.1 | |||||||||
| F16H9.1c.1 | |||||||||
| F16H9.1d.1 | |||||||||
| Other_sequence (40) | |||||||||
| Associated_feature (22) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00112305 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00044841 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013436 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031054 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00112304 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00112307 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00112306 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00112303 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00112308 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00112309 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1049 | ||||||||
| Expr11589 | |||||||||
| Expr1019382 | |||||||||
| Expr1032163 | |||||||||
| Expr1148805 | |||||||||
| Expr2015325 | |||||||||
| Expr2033559 | |||||||||
| Drives_construct | WBCnstr00000298 | ||||||||
| WBCnstr00004866 | |||||||||
| WBCnstr00008978 | |||||||||
| WBCnstr00010049 | |||||||||
| WBCnstr00035551 | |||||||||
| Construct_product | WBCnstr00004866 | ||||||||
| WBCnstr00010049 | |||||||||
| WBCnstr00035551 | |||||||||
| Antibody | WBAntibody00001586 | ||||||||
| Microarray_results (34) | |||||||||
| Expression_cluster (158) | |||||||||
| Interaction (33) | |||||||||
| Map_info | Map | X | Position | 8.11575 | Error | 0.023369 | |||
| Positive | Positive_clone | F16H9 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4581 | |||||||
| 4634 | |||||||||
| 5420 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00004281 | ||||||||
| WBPaper00004502 | |||||||||
| WBPaper00005080 | |||||||||
| WBPaper00010551 | |||||||||
| WBPaper00011223 | |||||||||
| WBPaper00011274 | |||||||||
| WBPaper00023092 | |||||||||
| WBPaper00029025 | |||||||||
| WBPaper00030979 | |||||||||
| WBPaper00032108 | |||||||||
| WBPaper00034288 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00043501 | |||||||||
| WBPaper00043948 | |||||||||
| WBPaper00048832 | |||||||||
| WBPaper00051547 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
