WormBase Tree Display for Gene: WBGene00003730

WBGene00003730 SMap: S_parent: Sequence: B0495
  Identity: Version: 1
    Name: CGC_name: nhx-2
      Sequence_name: B0495.4
      Molecular_name: B0495.4
        B0495.4.1
        CE48832
      Other_name: CELE_B0495.4 Accession_evidence: NDB BX284602
      Public_name: nhx-2
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:32 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nhx
    Allele (34)
    Strain: WBStrain00035710
    RNASeq_FPKM (74)
    GO_annotation (35)
    Ortholog: WBGene00057660 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00033870 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00136479 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00092516 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00144974 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00190248 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00141584 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00143982 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00129433 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00122315 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00051406 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00058383 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00063270 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00193796 Caenorhabditis brenneri From_analysis: WormBase-Compara
      CBOVI.g7100 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g9698 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g16574 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g1201 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g17464 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g18096 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g1572 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g5154 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g6757 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g17122 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00243.g7753 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_00243.g7754 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_07994.g21226 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_II.g5377 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold469.g1615 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00268.g8342 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_06917 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_005736 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g10232 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g10500 Panagrellus redivivus From_analysis: WormBase-Compara
      chrII_pilon.g5076 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00108084 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00258928 Strongyloides ratti From_analysis: WormBase-Compara
      FB:FBgn0040297 Drosophila melanogaster From_analysis: OrthoInspector
            Panther
            PhylomeDB
      ZFIN:ZDB-GENE-080225-43 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-060503-545 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-060503-640 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-080225-42 Danio rerio From_analysis: EnsEMBL-Compara
            OMA
            Panther
      HGNC:11071 Homo sapiens From_analysis: EnsEMBL-Compara
            OrthoInspector
            Panther
      HGNC:11073 Homo sapiens From_analysis: EnsEMBL-Compara
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      HGNC:11078 Homo sapiens From_analysis: EnsEMBL-Compara
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      MGI:105064 Mus musculus From_analysis: EnsEMBL-Compara
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      MGI:2685542 Mus musculus From_analysis: EnsEMBL-Compara
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      RGD:3720 Rattus norvegicus From_analysis: EnsEMBL-Compara
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      RGD:620473 Rattus norvegicus From_analysis: EnsEMBL-Compara
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
    Paralog: WBGene00003729 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00003736 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00003733 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00003735 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00003731 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00003943 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00003734 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00003732 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description (2)
  Disease_info: Potential_model: DOID:783 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:11078)
      DOID:0080065 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:11071)
      DOID:6000 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:11071)
      DOID:0060777 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:11073)
  Molecular_info: Corresponding_CDS: B0495.4
    Corresponding_CDS_history: B0495.4:wp239
    Corresponding_transcript: B0495.4.1
    Other_sequence (11)
    Associated_feature: WBsf988538
      WBsf988539
      WBsf1012587
      WBsf223370
  Experimental_info: RNAi_result (40)
    Expr_pattern: Expr113
      Expr2233
      Expr2241
      Expr8046
      Expr1020516
      Expr1031742
      Expr1143268
      Expr2014254
      Expr2032494
    Drives_construct (47)
    Construct_product: WBCnstr00009193
      WBCnstr00010721
      WBCnstr00019888
      WBCnstr00035911
    Antibody: WBAntibody00002657
    Microarray_results (18)
    Expression_cluster (213)
    Interaction (36)
  Map_info: Map: II Position: 0.523763 Error: 0.005206
    Positive: Positive_clone: B0495 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4530
        5562
    Pseudo_map_position
  Reference (26)
  Remark: Sequence connection from [Nehrke K, Melvin J]
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
    nxh-2 nxh-3 nxh-4 nxh-5 nxh-6 nxh-7 nxh-8 nxh-9 published in cgc5421 actually refer to nhx genes CGC_data_submission
  Method: Gene