WormBase Tree Display for Gene: WBGene00002980

WBGene00002980 Evidence: CGC_data_submission
  SMap: S_parent: Sequence: C32D5
  Identity: Version: 2
    Name: CGC_name: lgg-1 Person_evidence: WBPerson321
      Sequence_name: C32D5.9
      Molecular_name: C32D5.9
        C32D5.9.1
        CE01849
      Other_name: 2G636 Accession_evidence: EMBL AF326943
        atg-8.1 Person_evidence: WBPerson649
        CELE_C32D5.9 Accession_evidence: NDB BX284602
      Public_name: lgg-1
    DB_info: Database: AceView gene 2G636
        WormQTL gene WBGene00002980
        WormFlux gene WBGene00002980
        NDB locus_tag CELE_C32D5.9
        Panther gene CAEEL|WormBase=WBGene00002980|UniProtKB=Q09490
          family PTHR10969
        NCBI gene 174050
        RefSeq protein NM_062876.8
        SwissProt UniProtAcc Q09490
        TREEFAM TREEFAM_ID TF314556
        UniProt_GCRP UniProtAcc Q09490
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:30 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 29 Feb 2008 11:29:00 WBPerson2970 Name_change: Other_name: atg-8.1
    Status: Live
  Gene_info (11)
  Modifies_disease: DOID:332
  Modifies_disease_in_annotation: WBDOannot00001227
  Molecular_info: Corresponding_CDS: C32D5.9
    Corresponding_transcript: C32D5.9.1
    Other_sequence (181)
    Associated_feature (11)
  Experimental_info: RNAi_result (59)
    Expr_pattern (17)
    Drives_construct (18)
    Construct_product (37)
    Antibody: WBAntibody00002128
      WBAntibody00002775
      WBAntibody00002776
      WBAntibody00002864
      WBAntibody00002888
      WBAntibody00002907
      WBAntibody00003022
    Microarray_results (18)
    Expression_cluster: WBPaper00032097:CGH-1-associated-mRNA
      WBPaper00032528:L3_enriched
      WBPaper00033065:isp-1-1(qm150)_upregulated
      WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00038118:aak-2(gt33)_upregulated
      WBPaper00038118:stress_upregulated_N2
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044736:oscillating_dev_expression
      WBPaper00045050:csr-1(hypomorph)_downregulated
      WBPaper00045314:S.aureus-induced_N2
      WBPaper00045521:Oogenic
      WBPaper00045774:clk-1_upregulated
      WBPaper00045974:NSM_enriched_totalRNA_RNAseq
      WBPaper00046024:sleep_upregulated_oscillating
      WBPaper00046497:B.thuringiensis_0.5mix_upregulated_6h
      WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
      WBPaper00046497:B.thuringiensis_upregulated_protein
      WBPaper00048923:Aging_regulated
      WBPaper00048988:neuron_expressed
      WBPaper00049545:cco-1(RNAi)_upregulated
      WBPaper00049942:hsf-1(RNAi)_downregulated
      WBPaper00050199:hsf-1(ok600)_upregulated
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050344:ASER-neuron_enriched
      WBPaper00050448:KGB-1-induced
      WBPaper00050468:hlh-30-dependent_Cry5B_regulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_25C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
      WBPaper00050514:CEBP-1_interacting
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00050990:seam_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051245:intestine_cytoplasm_expressed
      WBPaper00051257:Levamisole_upregulated
      WBPaper00052884:emb-4(hc60)_upregulated
      WBPaper00053023:nlg-1(ok259)_downregulated
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053295:lin-22(ot267)_downregulated
      WBPaper00053295:lin-22(ot269)_downregulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053302:zidovudine_24h_regulated
      WBPaper00053388:dauer_regulated_Cluster4
      WBPaper00053713:Pheromone-induced_postdauer_vs_control_downregulated
      WBPaper00053713:Starvation-induced_postdauer_vs_control_upregulated
      WBPaper00053810:daf-2(e1370)_upregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00055049:S.gordonii_upregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055648:germline_expressed
      WBPaper00055969:electromagnetic-field_upregulated
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00056139:soil-microbiota_upregulated
      WBPaper00056471:S.aureus-4h_upregulated_N2
      WBPaper00057041:unc-70(cas983)_downregulated
      WBPaper00057068:Cadmium_upregulated
      WBPaper00057288:Cold_downregulated_protein
      WBPaper00057288:iff-1(RNAi)_upregulated_protein
      WBPaper00058948:PA14_downregulated
      WBPaper00059356:BAZ-2_SET-6_interacting
      WBPaper00059471:EGL-43_interacting
      WBPaper00059763:neuron_expressed
      WBPaper00059824:rnp-6(dh1127)_regulated_OP50
      WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
      WBPaper00059895:wounding_upregulated
      WBPaper00059987:Wounding_upregulated
      WBPaper00060014:set-2(zr2012)_upregulated
      WBPaper00060084:cco-1(RNAi)_upregulated_N2
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00061527:chd-7_16664-jmjd-3.1
      WBPaper00061651:AIZ_enriched
      WBPaper00061651:AVG_enriched
      WBPaper00061651:PDE_enriched
      WBPaper00061651:VB01_enriched
      WBPaper00061651:VB02_enriched
      WBPaper00061651:VB_enriched
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00062354:H.zoospora_6h_regulated
      WBPaper00062440:crh-1(n3315)_downregulated
      WBPaper00062456:doxycycline_downregulated_CB4856_protein
      WBPaper00064055:trl-1(cas1077)_downregulated_non-starved
      WBPaper00064055:trl-1(cas1077)_downregulated_starved
      WBPaper00064071:NHR-49_interacting
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064130:Beta-Amyloid_24h_downregulated_mRNA
      WBPaper00064532:pals-25(icb98)_upregulated
      WBPaper00064716:paraquat_downregulated
      WBPaper00064735:bet-1(RNAi)_vs_N2_upregulated
      WBPaper00064871:hypoxia_downregulated_F1
      WBPaper00065086:JU1400_N.ferruginous_regulated
      WBPaper00065120:body-muscle-transcriptome
      WBPaper00065258:anchor-cell_enriched
      WBPaper00065945:epidermis-rpoa-2(-)_downregulated_transcript
      WBPaper00065995:M.humicola-extract_downregulated_N2
      WBPaper00066062:xrep-4(lax137)_upregulated
      cgc4386_cluster_4_3
      cgc4489_group_9
      WBPaper00025032:cluster_45
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00030839:Larval_Pan_Neuronal
      WBPaper00030985:Enterococcus_faecalis_upregulated
      WBPaper00030985:Photorhabdus_luminescens_upregulated
      WBPaper00030985:Serratia_marcesens_downregulated
      WBPaper00032948:StarveUp2
      WBPaper00034739:N2moreDR1350
      WBPaper00034757:up_by_oxidative_stress
      WBPaper00035227:heat_shock_regulated
      WBPaper00035905:FBF-1_Associated
      WBPaper00036123:Atrazine_regulated
      WBPaper00036286:Pattern_F
      WBPaper00037901:GLD-1_mRNA_targets
      WBPaper00038231:Cry5B_1.5-fold_upregulated
      WBPaper00038231:Cry5B_2-fold_upregulated
      WBPaper00040184:hcf-1up_sir-2.1up_daf-2up
      WBPaper00040858:eQTL_age_regulated_aging
      WBPaper00040858:eQTL_age_regulated_developing
      WBPaper00040858:eQTL_regulated_aging
      WBPaper00040858:eQTL_regulated_old
      WBPaper00041370:spg-7(RNAi)_upregulated
      WBPaper00041606:CE_B.thuringiensis-DB27_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00042178:hlh-29(tm284)_upregulated
      WBPaper00044091:Bpseudomallei_induced_2h
      WBPaper00045015:nhr-25(RNAi)_upregulated
      WBPaper00045960:L1-L4-lethargus_upregulated
      WBPaper00045960:L4-lethargus_upregulated
      WBPaper00048989:N2_rapamycin_downregulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_E_pi(83_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_ME
      [cgc6390]:Cluster_A
    Interaction: WBInteraction000009352
      WBInteraction000033454
      WBInteraction000044285
      WBInteraction000045492
      WBInteraction000051943
      WBInteraction000051944
      WBInteraction000134235
      WBInteraction000136452
      WBInteraction000139370
      WBInteraction000141314
      WBInteraction000142795
      WBInteraction000145695
      WBInteraction000146629
      WBInteraction000156692
      WBInteraction000157109
      WBInteraction000160053
      WBInteraction000160127
      WBInteraction000162400
      WBInteraction000169462
      WBInteraction000169463
      WBInteraction000172274
      WBInteraction000177370
      WBInteraction000181224
      WBInteraction000181290
      WBInteraction000185793
      WBInteraction000186247
      WBInteraction000191169
      WBInteraction000194205
      WBInteraction000194285
      WBInteraction000197581
      WBInteraction000207506
      WBInteraction000207945
      WBInteraction000210280
      WBInteraction000219230
      WBInteraction000221694
      WBInteraction000222039
      WBInteraction000227063
      WBInteraction000227669
      WBInteraction000230600
      WBInteraction000230648
      WBInteraction000242311
      WBInteraction000247564
      WBInteraction000249146
      WBInteraction000250732
      WBInteraction000255281
      WBInteraction000258083
      WBInteraction000259001
      WBInteraction000263131
      WBInteraction000266498
      WBInteraction000266943
      WBInteraction000266986
      WBInteraction000269559
      WBInteraction000270947
      WBInteraction000282992
      WBInteraction000284368
      WBInteraction000286312
      WBInteraction000291502
      WBInteraction000292144
      WBInteraction000292926
      WBInteraction000293891
      WBInteraction000294080
      WBInteraction000297556
      WBInteraction000300498
      WBInteraction000301359
      WBInteraction000303343
      WBInteraction000303981
      WBInteraction000307903
      WBInteraction000311122
      WBInteraction000317054
      WBInteraction000325334
      WBInteraction000332020
      WBInteraction000335671
      WBInteraction000336720
      WBInteraction000338045
      WBInteraction000339601
      WBInteraction000345139
      WBInteraction000351210
      WBInteraction000352387
      WBInteraction000356824
      WBInteraction000360524
      WBInteraction000364182
      WBInteraction000367013
      WBInteraction000368689
      WBInteraction000368708
      WBInteraction000369838
      WBInteraction000372230
      WBInteraction000377000
      WBInteraction000379458
      WBInteraction000384210
      WBInteraction000384798
      WBInteraction000388681
      WBInteraction000389540
      WBInteraction000390313
      WBInteraction000391746
      WBInteraction000392172
      WBInteraction000392973
      WBInteraction000393872
      WBInteraction000394638
      WBInteraction000396589
      WBInteraction000396841
      WBInteraction000397375
      WBInteraction000399367
      WBInteraction000400859
      WBInteraction000402488
      WBInteraction000403652
      WBInteraction000413082
      WBInteraction000413388
      WBInteraction000415250
      WBInteraction000415251
      WBInteraction000415899
      WBInteraction000418559
      WBInteraction000419263
      WBInteraction000420799
      WBInteraction000421683
      WBInteraction000426966
      WBInteraction000428209
      WBInteraction000428510
      WBInteraction000432298
      WBInteraction000435290
      WBInteraction000436003
      WBInteraction000438157
      WBInteraction000439180
      WBInteraction000445583
      WBInteraction000447940
      WBInteraction000453723
      WBInteraction000456579
      WBInteraction000461776
      WBInteraction000462306
      WBInteraction000463947
      WBInteraction000464533
      WBInteraction000465342
      WBInteraction000466006
      WBInteraction000466369
      WBInteraction000466804
      WBInteraction000467335
      WBInteraction000469008
      WBInteraction000469157
      WBInteraction000470768
      WBInteraction000471229
      WBInteraction000472457
      WBInteraction000473060
      WBInteraction000473077
      WBInteraction000474156
      WBInteraction000500884
      WBInteraction000500885
      WBInteraction000500886
      WBInteraction000501060
      WBInteraction000501061
      WBInteraction000501062
      WBInteraction000501066
      WBInteraction000501067
      WBInteraction000501070
      WBInteraction000501080
      WBInteraction000501092
      WBInteraction000502345
      WBInteraction000503035
      WBInteraction000503452
      WBInteraction000503863
      WBInteraction000503864
      WBInteraction000503865
      WBInteraction000503866
      WBInteraction000503867
      WBInteraction000503878
      WBInteraction000503879
      WBInteraction000503880
      WBInteraction000503881
      WBInteraction000503882
      WBInteraction000504405
      WBInteraction000504406
      WBInteraction000504753
      WBInteraction000505060
      WBInteraction000505152
      WBInteraction000505156
      WBInteraction000505157
      WBInteraction000505158
      WBInteraction000518437
      WBInteraction000518448
      WBInteraction000518848
      WBInteraction000518849
      WBInteraction000519125
      WBInteraction000519651
      WBInteraction000519653
      WBInteraction000519654
      WBInteraction000519657
      WBInteraction000519658
      WBInteraction000519659
      WBInteraction000519664
      WBInteraction000519676
      WBInteraction000520165
      WBInteraction000525232
      WBInteraction000525257
      WBInteraction000535526
      WBInteraction000540223
      WBInteraction000540224
      WBInteraction000540228
      WBInteraction000540987
      WBInteraction000542161
      WBInteraction000542177
      WBInteraction000542178
      WBInteraction000542180
      WBInteraction000542183
      WBInteraction000542185
      WBInteraction000542188
      WBInteraction000542189
      WBInteraction000542464
      WBInteraction000542465
      WBInteraction000542466
      WBInteraction000542467
      WBInteraction000542468
      WBInteraction000542986
      WBInteraction000543595
      WBInteraction000543596
      WBInteraction000543615
      WBInteraction000544364
      WBInteraction000547164
      WBInteraction000547372
      WBInteraction000547411
      WBInteraction000547412
      WBInteraction000547413
      WBInteraction000547414
      WBInteraction000556578
      WBInteraction000558194
      WBInteraction000560374
      WBInteraction000560820
      WBInteraction000560821
      WBInteraction000560822
      WBInteraction000560823
      WBInteraction000560824
      WBInteraction000560825
      WBInteraction000560826
      WBInteraction000560827
      WBInteraction000560828
      WBInteraction000560829
      WBInteraction000560830
      WBInteraction000560831
      WBInteraction000560832
      WBInteraction000560833
      WBInteraction000560834
      WBInteraction000560835
      WBInteraction000560836
      WBInteraction000560837
      WBInteraction000560838
      WBInteraction000560839
      WBInteraction000560840
      WBInteraction000560841
      WBInteraction000560842
      WBInteraction000560843
      WBInteraction000560844
      WBInteraction000560845
      WBInteraction000560846
      WBInteraction000560847
      WBInteraction000560848
      WBInteraction000560849
      WBInteraction000560850
      WBInteraction000560851
      WBInteraction000560852
      WBInteraction000560853
      WBInteraction000560854
      WBInteraction000560855
      WBInteraction000560856
      WBInteraction000560857
      WBInteraction000560858
      WBInteraction000560859
      WBInteraction000560860
      WBInteraction000560861
      WBInteraction000560862
      WBInteraction000560863
      WBInteraction000560864
      WBInteraction000560865
      WBInteraction000560866
      WBInteraction000560867
      WBInteraction000560868
      WBInteraction000560869
      WBInteraction000560870
      WBInteraction000560871
      WBInteraction000560872
      WBInteraction000560873
      WBInteraction000560874
      WBInteraction000560875
      WBInteraction000571311
      WBInteraction000571672
      WBInteraction000571685
      WBInteraction000573293
      WBInteraction000573294
      WBInteraction000579074
      WBInteraction000579120
      WBInteraction000580135
    WBProcess: WBbiopr:00000003
  Map_info (3)
  Reference (176)
  Remark: Sequence connection from [Kimura Y]
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene