WormBase Tree Display for Gene: WBGene00001108

WBGene00001108 SMap: S_parent: Sequence: H02I12
  Identity: Version: 1
    Name: CGC_name: dsl-6 Person_evidence: WBPerson220
      Sequence_name: H02I12.4
      Molecular_name: H02I12.4
        H02I12.4.1
        CE36597
      Other_name: CELE_H02I12.4 Accession_evidence: NDB BX284604
      Public_name: dsl-6
    DB_info: Database: AceView gene 4M162
        WormQTL gene WBGene00001108
        WormFlux gene WBGene00001108
        NDB locus_tag CELE_H02I12.4
        Panther gene CAEEL|WormBase=WBGene00001108|UniProtKB=O45602
          family PTHR22669
        NCBI gene 178063
        RefSeq protein NM_069747.6
        TREEFAM TREEFAM_ID TF315366
        TrEMBL UniProtAcc O45602
        UniProt_GCRP UniProtAcc O45602
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:23 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dsl
    Allele (28)
    Strain: WBStrain00032453
    RNASeq_FPKM (74)
    GO_annotation: 00034849
      00034850
      00034851
      00108275
      00108276
      00108277
      00108278
      00108279
    Ortholog: WBGene00137058 Caenorhabditis japonica From_analysis: OMA
            WormBase-Compara
      CBOVI.g550 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP31.g25532 Caenorhabditis uteleia From_analysis: WormBase-Compara
      chrIV_pilon.g11845 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00001103 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00001104 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00001105 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00001107 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00002246 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00001109 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00021525 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00021513 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
    Structured_description: Concise_description: dsl-6 encodes a putative transmembrane protein whose extracellular domainhas a single DSL and EGF domains in series, somewhat like Delta/LAG-2;DSL-6 belongs to a nematode-specific family of Delta/LAG-2-like proteinsthat includes DSL-1, -2, -3, -5, -6, and -7. Paper_evidence: WBPaper00006450
          Curator_confirmed: WBPerson567
          Date_last_updated: 21 Aug 2006 00:00:00
      Automated_description: Predicted to enable Notch binding activity. Predicted to be involved in cell fate specification. Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: H02I12.4
    Corresponding_CDS_history: H02I12.4:wp123
    Corresponding_transcript: H02I12.4.1
    Associated_feature: WBsf652211
      WBsf668329
  Experimental_info: RNAi_result: WBRNAi00049264 Inferred_automatically: RNAi_primary
      WBRNAi00063611 Inferred_automatically: RNAi_primary
      WBRNAi00081025 Inferred_automatically: RNAi_primary
      WBRNAi00033645 Inferred_automatically: RNAi_primary
      WBRNAi00081006 Inferred_automatically: RNAi_primary
      WBRNAi00067722 Inferred_automatically: RNAi_primary
      WBRNAi00081024 Inferred_automatically: RNAi_primary
      WBRNAi00016166 Inferred_automatically: RNAi_primary
      WBRNAi00081007 Inferred_automatically: RNAi_primary
      WBRNAi00063604 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr2849
      Expr8702
      Expr1015994
      Expr1030706
      Expr1153007
      Expr2011110
      Expr2029346
    Drives_construct: WBCnstr00007164
      WBCnstr00010984
      WBCnstr00013470
      WBCnstr00015172
      WBCnstr00037081
    Construct_product: WBCnstr00037081
    Microarray_results (16)
    Expression_cluster (148)
    Interaction (175)
  Map_info: Map: IV Position: 4.97423 Error: 0.000977
    Positive: Positive_clone: H02I12 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00006450
    WBPaper00017594
    WBPaper00034675
    WBPaper00040714
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene