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WormBase Tree Display for Gene: WBGene00001108

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Name Class

WBGene00001108SMapS_parentSequenceH02I12
IdentityVersion1
NameCGC_namedsl-6Person_evidenceWBPerson220
Sequence_nameH02I12.4
Molecular_nameH02I12.4
H02I12.4.1
CE36597
Other_nameCELE_H02I12.4Accession_evidenceNDBBX284604
Public_namedsl-6
DB_infoDatabaseAceViewgene4M162
WormQTLgeneWBGene00001108
WormFluxgeneWBGene00001108
NDBlocus_tagCELE_H02I12.4
PanthergeneCAEEL|WormBase=WBGene00001108|UniProtKB=O45602
familyPTHR22669
NCBIgene178063
RefSeqproteinNM_069747.6
TREEFAMTREEFAM_IDTF315366
TrEMBLUniProtAccO45602
UniProt_GCRPUniProtAccO45602
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:23WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdsl
Allele (28)
StrainWBStrain00032453
RNASeq_FPKM (74)
GO_annotation00034849
00034850
00034851
00108275
00108276
00108277
00108278
00108279
OrthologWBGene00137058Caenorhabditis japonicaFrom_analysisOMA
WormBase-Compara
CBOVI.g550Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP31.g25532Caenorhabditis uteleiaFrom_analysisWormBase-Compara
chrIV_pilon.g11845Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00001103Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00001104Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00001105Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00001107Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00002246Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001109Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00021525Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00021513Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
Structured_descriptionConcise_descriptiondsl-6 encodes a putative transmembrane protein whose extracellular domainhas a single DSL and EGF domains in series, somewhat like Delta/LAG-2;DSL-6 belongs to a nematode-specific family of Delta/LAG-2-like proteinsthat includes DSL-1, -2, -3, -5, -6, and -7.Paper_evidenceWBPaper00006450
Curator_confirmedWBPerson567
Date_last_updated21 Aug 2006 00:00:00
Automated_descriptionPredicted to enable Notch binding activity. Predicted to be involved in cell fate specification. Predicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSH02I12.4
Corresponding_CDS_historyH02I12.4:wp123
Corresponding_transcriptH02I12.4.1
Associated_featureWBsf652211
WBsf668329
Experimental_infoRNAi_resultWBRNAi00049264Inferred_automaticallyRNAi_primary
WBRNAi00063611Inferred_automaticallyRNAi_primary
WBRNAi00081025Inferred_automaticallyRNAi_primary
WBRNAi00033645Inferred_automaticallyRNAi_primary
WBRNAi00081006Inferred_automaticallyRNAi_primary
WBRNAi00067722Inferred_automaticallyRNAi_primary
WBRNAi00081024Inferred_automaticallyRNAi_primary
WBRNAi00016166Inferred_automaticallyRNAi_primary
WBRNAi00081007Inferred_automaticallyRNAi_primary
WBRNAi00063604Inferred_automaticallyRNAi_primary
Expr_patternExpr2849
Expr8702
Expr1015994
Expr1030706
Expr1153007
Expr2011110
Expr2029346
Drives_constructWBCnstr00007164
WBCnstr00010984
WBCnstr00013470
WBCnstr00015172
WBCnstr00037081
Construct_productWBCnstr00037081
Microarray_results (16)
Expression_cluster (148)
InteractionWBInteraction000007176
WBInteraction000051477
WBInteraction000051495
WBInteraction000051496
WBInteraction000110579
WBInteraction000115670
WBInteraction000124170
WBInteraction000127100
WBInteraction000136014
WBInteraction000139324
WBInteraction000140667
WBInteraction000142529
WBInteraction000143650
WBInteraction000144942
WBInteraction000149554
WBInteraction000152875
WBInteraction000157176
WBInteraction000163995
WBInteraction000172757
WBInteraction000179698
WBInteraction000180535
WBInteraction000181455
WBInteraction000183354
WBInteraction000183548
WBInteraction000184231
WBInteraction000184565
WBInteraction000186260
WBInteraction000189638
WBInteraction000190127
WBInteraction000191336
WBInteraction000191397
WBInteraction000193668
WBInteraction000194024
WBInteraction000196751
WBInteraction000197908
WBInteraction000198421
WBInteraction000200930
WBInteraction000204941
WBInteraction000205960
WBInteraction000207490
WBInteraction000208904
WBInteraction000210995
WBInteraction000211945
WBInteraction000212287
WBInteraction000212513
WBInteraction000212856
WBInteraction000213370
WBInteraction000213385
WBInteraction000214583
WBInteraction000223101
WBInteraction000223613
WBInteraction000232571
WBInteraction000237834
WBInteraction000238856
WBInteraction000239461
WBInteraction000240959
WBInteraction000244196
WBInteraction000245782
WBInteraction000252969
WBInteraction000255151
WBInteraction000255991
WBInteraction000261242
WBInteraction000263935
WBInteraction000264205
WBInteraction000266141
WBInteraction000268742
WBInteraction000270341
WBInteraction000272995
WBInteraction000276453
WBInteraction000277501
WBInteraction000279600
WBInteraction000282332
WBInteraction000283414
WBInteraction000284747
WBInteraction000286856
WBInteraction000290419
WBInteraction000293356
WBInteraction000294791
WBInteraction000298259
WBInteraction000303653
WBInteraction000303749
WBInteraction000304183
WBInteraction000304453
WBInteraction000308511
WBInteraction000311784
WBInteraction000312528
WBInteraction000313035
WBInteraction000315206
WBInteraction000316111
WBInteraction000320073
WBInteraction000321562
WBInteraction000322903
WBInteraction000323162
WBInteraction000328124
WBInteraction000329358
WBInteraction000329867
WBInteraction000330727
WBInteraction000335999
WBInteraction000342102
WBInteraction000348353
WBInteraction000348785
WBInteraction000349460
WBInteraction000352610
WBInteraction000359379
WBInteraction000359420
WBInteraction000360137
WBInteraction000360855
WBInteraction000362030
WBInteraction000362034
WBInteraction000362145
WBInteraction000364673
WBInteraction000364874
WBInteraction000366512
WBInteraction000369385
WBInteraction000369697
WBInteraction000378387
WBInteraction000379879
WBInteraction000380501
WBInteraction000382895
WBInteraction000385409
WBInteraction000386445
WBInteraction000386963
WBInteraction000389289
WBInteraction000390627
WBInteraction000393932
WBInteraction000395676
WBInteraction000396695
WBInteraction000398747
WBInteraction000399606
WBInteraction000400254
WBInteraction000400451
WBInteraction000403002
WBInteraction000405585
WBInteraction000406554
WBInteraction000406743
WBInteraction000406858
WBInteraction000408198
WBInteraction000414269
WBInteraction000415337
WBInteraction000416257
WBInteraction000416639
WBInteraction000419850
WBInteraction000422003
WBInteraction000423034
WBInteraction000423358
WBInteraction000423825
WBInteraction000423972
WBInteraction000424583
WBInteraction000424596
WBInteraction000424656
WBInteraction000425033
WBInteraction000426841
WBInteraction000429022
WBInteraction000430071
WBInteraction000430984
WBInteraction000431900
WBInteraction000432456
WBInteraction000433102
WBInteraction000433842
WBInteraction000436769
WBInteraction000437557
WBInteraction000437817
WBInteraction000438525
WBInteraction000440644
WBInteraction000443837
WBInteraction000443861
WBInteraction000444206
WBInteraction000444908
WBInteraction000447711
WBInteraction000449646
WBInteraction000449763
WBInteraction000452569
WBInteraction000453805
WBInteraction000457130
WBInteraction000460561
Map_infoMapIVPosition4.97423Error0.000977
PositivePositive_cloneH02I12Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00006450
WBPaper00017594
WBPaper00034675
WBPaper00040714
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene