WormBase Tree Display for Gene: WBGene00001104
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| WBGene00001104 | SMap | S_parent | Sequence | W09G12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | dsl-2 | Person_evidence | WBPerson220 | |||||
| Sequence_name | W09G12.1 | ||||||||
| Molecular_name | W09G12.1 | ||||||||
| W09G12.1.1 | |||||||||
| CE23182 | |||||||||
| Other_name | CELE_W09G12.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | dsl-2 | ||||||||
| DB_info | Database | AceView | gene | 4B956 | |||||
| WormQTL | gene | WBGene00001104 | |||||||
| WormFlux | gene | WBGene00001104 | |||||||
| NDB | locus_tag | CELE_W09G12.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00001104|UniProtKB=O45203 | |||||||
| family | PTHR22669 | ||||||||
| NCBI | gene | 176938 | |||||||
| RefSeq | protein | NM_067651.7 | |||||||
| TREEFAM | TREEFAM_ID | TF315366 | |||||||
| TrEMBL | UniProtAcc | O45203 | |||||||
| UniProt_GCRP | UniProtAcc | O45203 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:23 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dsl | ||||||||
| Allele (87) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00034019 | ||||||||
| 00034020 | |||||||||
| 00034021 | |||||||||
| 00108258 | |||||||||
| 00108259 | |||||||||
| 00108260 | |||||||||
| 00108261 | |||||||||
| 00108262 | |||||||||
| Ortholog (12) | |||||||||
| Paralog | WBGene00001103 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00002246 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00001105 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00001107 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00001108 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00001109 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021525 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021513 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | dsl-2 encodes a putative transmembrane protein whose extracellular domainhas single DSL and EGF domains in series, somewhat like Delta/LAG-2; DSL-2belongs to a nematode-specific family of Delta/LAG-2-like proteins thatincludes DSL-1, -2, -3, -5, -6, and -7. | Paper_evidence | WBPaper00006450 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 21 Aug 2006 00:00:00 | ||||||||
| Automated_description | Predicted to enable Notch binding activity. Predicted to be involved in cell fate specification. Predicted to be located in membrane. Expressed in head and tail. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W09G12.1 | |||||||
| Corresponding_transcript | W09G12.1.1 | ||||||||
| Other_sequence | MP00699 | ||||||||
| MPC00703_1 | |||||||||
| Associated_feature | WBsf651640 | ||||||||
| WBsf655498 | |||||||||
| WBsf667736 | |||||||||
| WBsf229750 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00055055 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00063600 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00063607 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00081018 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00081017 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019830 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00081000 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00080999 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr2845 | ||||||||
| Expr8701 | |||||||||
| Expr1011696 | |||||||||
| Expr1030704 | |||||||||
| Expr1158593 | |||||||||
| Expr2011106 | |||||||||
| Expr2029342 | |||||||||
| Drives_construct | WBCnstr00007163 | ||||||||
| WBCnstr00010980 | |||||||||
| WBCnstr00013469 | |||||||||
| Construct_product | WBCnstr00013469 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (198) | |||||||||
| Interaction | WBInteraction000051470 | ||||||||
| WBInteraction000051471 | |||||||||
| WBInteraction000051488 | |||||||||
| WBInteraction000051489 | |||||||||
| WBInteraction000287379 | |||||||||
| WBInteraction000294049 | |||||||||
| WBInteraction000343348 | |||||||||
| WBInteraction000366070 | |||||||||
| WBInteraction000395248 | |||||||||
| WBInteraction000399939 | |||||||||
| Map_info | Map | IV | Position | -21.1821 | Error | 0.055467 | |||
| Positive | Positive_clone | W09G12 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 4561 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00006450 | ||||||||
| WBPaper00034675 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
