WormBase Tree Display for Gene: WBGene00043147
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| WBGene00043147 | SMap | S_parent | Sequence | C24D10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | nspd-6 | Person_evidence | WBPerson1983 | |||||
| Sequence_name | C24D10.8 | ||||||||
| Molecular_name | C24D10.8 | ||||||||
| C24D10.8.1 | |||||||||
| CE16879 | |||||||||
| Other_name | CELE_C24D10.8 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | nspd-6 | ||||||||
| DB_info | Database | WormQTL | gene | WBGene00043147 | |||||
| WormFlux | gene | WBGene00043147 | |||||||
| NDB | locus_tag | CELE_C24D10.8 | |||||||
| NCBI | gene | 4926899 | |||||||
| RefSeq | protein | NM_001083195.3 | |||||||
| TREEFAM | TREEFAM_ID | TF319437 | |||||||
| TrEMBL | UniProtAcc | G5EG23 | |||||||
| UniProt_GCRP | UniProtAcc | G5EG23 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 04 Oct 2004 10:58:09 | WBPerson1971 | Event | Created | |||
| Killed | |||||||||
| 2 | 03 Oct 2006 09:35:28 | WBPerson1849 | Event | Resurrected | |||||
| 3 | 03 Oct 2006 09:54:23 | WBPerson2970 | Name_change | CGC_name | nspd-6 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nspd | ||||||||
| Allele | WBVar01499754 | ||||||||
| WBVar01499395 | |||||||||
| WBVar01499396 | |||||||||
| WBVar01499242 | |||||||||
| WBVar01499633 | |||||||||
| WBVar01515756 | |||||||||
| WBVar01500245 | |||||||||
| WBVar00297427 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (84) | |||||||||
| Paralog | WBGene00010633 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00012781 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| WormBase-Compara | |||||||||
| WBGene00017386 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00017808 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020715 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020860 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021280 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00022754 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| WBGene00016058 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in amphid sheath cell; germ line; intestine; sperm; and in male based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and dpy-10 based on microarray and RNA-seq studies. Is affected by twenty-four chemicals including Ethanol; methylmercury hydroxide; and manganese chloride based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF780, Caenorhabditis species and Caenorhabditis elegans protein of unknown function (DUF780). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C24D10.8 | |||||||
| Corresponding_CDS_history | C24D10.8:wp122 | ||||||||
| Corresponding_transcript | C24D10.8.1 | ||||||||
| Other_sequence | CBC05875_1 | ||||||||
| CR00100 | |||||||||
| CJC01067_1 | |||||||||
| Associated_feature (2) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00041089 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00011109 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011108 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041090 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1145126 | ||||||||
| Expr2014483 | |||||||||
| Expr2032722 | |||||||||
| Drives_construct | WBCnstr00023825 | ||||||||
| Construct_product | WBCnstr00023825 | ||||||||
| Microarray_results | SMD_C24D10.8 | ||||||||
| 171880_x_at | |||||||||
| 172527_x_at | |||||||||
| 172569_x_at | |||||||||
| A_12_P142110 | |||||||||
| Aff_C24D10.8 | |||||||||
| GPL19516_CGZ0005724 | |||||||||
| GPL21109_C24D10.8 | |||||||||
| GPL3518_CE16879 | |||||||||
| GPL8304_CE_WBGene00043147_A | |||||||||
| Expression_cluster (176) | |||||||||
| Map_info | Map | IV | Position | 1.53696 | |||||
| Positive | Positive_clone | C24D10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark (4) | |||||||||
| Method | Gene |
