WormBase Tree Display for Gene: WBGene00022754
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WBGene00022754 | SMap | S_parent | Sequence | ZK484 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | nspd-1 | Person_evidence | WBPerson1983 | |||
Sequence_name | ZK484.8 | ||||||
Molecular_name | ZK484.8 | ||||||
ZK484.8.1 | |||||||
CE15351 | |||||||
Other_name | CELE_ZK484.8 | Accession_evidence | NDB | BX284601 | |||
Public_name | nspd-1 | ||||||
DB_info | Database | AceView | gene | 1G674 | |||
WormQTL | gene | WBGene00022754 | |||||
WormFlux | gene | WBGene00022754 | |||||
NDB | locus_tag | CELE_ZK484.8 | |||||
Panther | gene | CAEEL|WormBase=WBGene00022754|UniProtKB=O44902 | |||||
family | PTHR35375 | ||||||
NCBI | gene | 172292 | |||||
RefSeq | protein | NM_059358.6 | |||||
TREEFAM | TREEFAM_ID | TF319437 | |||||
TrEMBL | UniProtAcc | O44902 | |||||
UniProt_GCRP | UniProtAcc | O44902 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | nspd | ||||||
Allele | WBVar01498782 | ||||||
WBVar00537250 | |||||||
WBVar01499786 | |||||||
WBVar01499054 | |||||||
WBVar00641919 | |||||||
WBVar00641920 | |||||||
WBVar00641921 | |||||||
WBVar01498959 | |||||||
WBVar01500249 | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (87) | |||||||
Paralog | WBGene00010633 | Caenorhabditis elegans | From_analysis (4) | ||||
WBGene00012781 | Caenorhabditis elegans | From_analysis (3) | |||||
WBGene00016058 | Caenorhabditis elegans | From_analysis (2) | |||||
WBGene00017386 | Caenorhabditis elegans | From_analysis (3) | |||||
WBGene00017808 | Caenorhabditis elegans | From_analysis (4) | |||||
WBGene00020715 | Caenorhabditis elegans | From_analysis (3) | |||||
WBGene00020860 | Caenorhabditis elegans | From_analysis (4) | |||||
WBGene00021280 | Caenorhabditis elegans | From_analysis (4) | |||||
WBGene00043147 | Caenorhabditis elegans | From_analysis (3) | |||||
Structured_description | Automated_description | Enriched in several structures, including AVK; amphid sheath cell; coelomocyte; intestine; and sperm based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and age-1 based on microarray; tiling array; and RNA-seq studies. Is affected by twenty-two chemicals including Ethanol; methylmercury hydroxide; and nicotinic acid based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF780, Caenorhabditis species and Caenorhabditis elegans protein of unknown function (DUF780). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | ZK484.8 | |||||
Corresponding_transcript | ZK484.8.1 | ||||||
Other_sequence | CBC01618_1 | ||||||
Associated_feature | WBsf219540 | ||||||
Experimental_info | RNAi_result | WBRNAi00059452 | Inferred_automatically | RNAi_primary | |||
WBRNAi00004941 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00022620 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00038310 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1162878 | ||||||
Expr2014478 | |||||||
Expr2032717 | |||||||
Drives_construct | WBCnstr00024001 | ||||||
Construct_product | WBCnstr00024001 | ||||||
Microarray_results (13) | |||||||
Expression_cluster (241) | |||||||
Interaction (195) | |||||||
Map_info | Map | I | Position | 0.781024 | |||
Positive | Positive_clone | ZK484 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |