WormBase Tree Display for Gene: WBGene00020715
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WBGene00020715 | SMap | S_parent | Sequence | T23B7 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | nspd-4 | Person_evidence | WBPerson1983 | |||
Sequence_name | T23B7.1 | ||||||
Molecular_name | T23B7.1 | ||||||
T23B7.1.1 | |||||||
CE02882 | |||||||
Other_name | CELE_T23B7.1 | Accession_evidence | NDB | BX284602 | |||
Public_name | nspd-4 | ||||||
DB_info | Database | AceView | gene | 2F133 | |||
WormQTL | gene | WBGene00020715 | |||||
WormFlux | gene | WBGene00020715 | |||||
NDB | locus_tag | CELE_T23B7.1 | |||||
NCBI | gene | 173835 | |||||
RefSeq | protein | NM_062470.5 | |||||
TREEFAM | TREEFAM_ID | TF319437 | |||||
TrEMBL | UniProtAcc | G5EES8 | |||||
UniProt_GCRP | UniProtAcc | G5EES8 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | nspd | ||||||
Allele | WBVar01499702 | ||||||
WBVar02151795 | |||||||
WBVar01498435 | |||||||
WBVar00728426 | |||||||
WBVar00728427 | |||||||
WBVar00728428 | |||||||
WBVar01783225 | |||||||
WBVar01719670 | |||||||
WBVar01719671 | |||||||
WBVar02150103 | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (85) | |||||||
Paralog | WBGene00010633 | Caenorhabditis elegans | From_analysis (3) | ||||
WBGene00012781 | Caenorhabditis elegans | From_analysis (2) | |||||
WBGene00017386 | Caenorhabditis elegans | From_analysis (2) | |||||
WBGene00017808 | Caenorhabditis elegans | From_analysis (3) | |||||
WBGene00043147 | Caenorhabditis elegans | From_analysis (3) | |||||
WBGene00020860 | Caenorhabditis elegans | From_analysis (3) | |||||
WBGene00021280 | Caenorhabditis elegans | From_analysis (3) | |||||
WBGene00022754 | Caenorhabditis elegans | From_analysis (3) | |||||
WBGene00016058 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Automated_description | Enriched in arcade cell; intestine; pharyngeal-intestinal valve cell; sperm; and in male based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; age-1; and dpy-10 based on microarray and RNA-seq studies. Is affected by twenty-nine chemicals including Ethanol; methylmercuric chloride; and rotenone based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF780, Caenorhabditis species and Caenorhabditis elegans protein of unknown function (DUF780). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T23B7.1 | |||||
Corresponding_transcript | T23B7.1.1 | ||||||
Other_sequence | PP02339 | ||||||
Associated_feature | WBsf987719 | ||||||
WBsf1012141 | |||||||
WBsf221186 | |||||||
Experimental_info | RNAi_result | WBRNAi00019060 | Inferred_automatically | RNAi_primary | |||
WBRNAi00053901 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00044415 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00035848 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00013149 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1157446 | ||||||
Expr2014481 | |||||||
Expr2032720 | |||||||
Drives_construct | WBCnstr00024938 | ||||||
Construct_product | WBCnstr00024938 | ||||||
Microarray_results (17) | |||||||
Expression_cluster (205) | |||||||
Interaction (229) | |||||||
Map_info | Map | II | Position | -2.99254 | |||
Positive | Positive_clone | T23B7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |