WormBase Tree Display for Gene: WBGene00020715
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WBGene00020715 | SMap | S_parent | Sequence | T23B7 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name (5) | |||||||||
DB_info | Database | AceView | gene | 2F133 | |||||
WormQTL | gene | WBGene00020715 | |||||||
WormFlux | gene | WBGene00020715 | |||||||
NDB | locus_tag | CELE_T23B7.1 | |||||||
NCBI | gene | 173835 | |||||||
RefSeq | protein | NM_062470.5 | |||||||
TREEFAM | TREEFAM_ID | TF319437 | |||||||
TrEMBL | UniProtAcc | G5EES8 | |||||||
UniProt_GCRP | UniProtAcc | G5EES8 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 03 Oct 2006 09:54:23 | WBPerson2970 | Name_change | CGC_name | nspd-4 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nspd | ||||||||
Allele | WBVar01499702 | ||||||||
WBVar02151795 | |||||||||
WBVar01498435 | |||||||||
WBVar00728426 | |||||||||
WBVar00728427 | |||||||||
WBVar00728428 | |||||||||
WBVar01783225 | |||||||||
WBVar01719670 | |||||||||
WBVar01719671 | |||||||||
WBVar02150103 | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (85) | |||||||||
Paralog | WBGene00010633 | Caenorhabditis elegans | From_analysis (3) | ||||||
WBGene00012781 | Caenorhabditis elegans | From_analysis (2) | |||||||
WBGene00017386 | Caenorhabditis elegans | From_analysis (2) | |||||||
WBGene00017808 | Caenorhabditis elegans | From_analysis (3) | |||||||
WBGene00043147 | Caenorhabditis elegans | From_analysis (3) | |||||||
WBGene00020860 | Caenorhabditis elegans | From_analysis (3) | |||||||
WBGene00021280 | Caenorhabditis elegans | From_analysis (3) | |||||||
WBGene00022754 | Caenorhabditis elegans | From_analysis (3) | |||||||
WBGene00016058 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Enriched in arcade cell; intestine; pharyngeal-intestinal valve cell; sperm; and in male based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; age-1; and dpy-10 based on microarray and RNA-seq studies. Is affected by twenty-nine chemicals including Ethanol; methylmercuric chloride; and rotenone based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF780, Caenorhabditis species and Caenorhabditis elegans protein of unknown function (DUF780). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T23B7.1 | |||||||
Corresponding_transcript | T23B7.1.1 | ||||||||
Other_sequence | PP02339 | ||||||||
Associated_feature | WBsf987719 | ||||||||
WBsf1012141 | |||||||||
WBsf221186 | |||||||||
Experimental_info | RNAi_result | WBRNAi00019060 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00053901 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00044415 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00035848 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00013149 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1157446 | ||||||||
Expr2014481 | |||||||||
Expr2032720 | |||||||||
Drives_construct | WBCnstr00024938 | ||||||||
Construct_product | WBCnstr00024938 | ||||||||
Microarray_results (17) | |||||||||
Expression_cluster (205) | |||||||||
Interaction (229) | |||||||||
Map_info | Map | II | Position | -2.99254 | |||||
Positive | Positive_clone | T23B7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |