WormBase Tree Display for Gene: WBGene00016058
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WBGene00016058 | SMap | S_parent | Sequence | C24D10 | ||
---|---|---|---|---|---|---|
Identity | Version | 2 | ||||
Name (5) | ||||||
DB_info | Database | AceView | gene | 4F928 | ||
WormQTL | gene | WBGene00016058 | ||||
WormFlux | gene | WBGene00016058 | ||||
NDB | locus_tag | CELE_C24D10.7 | ||||
Panther | gene | CAEEL|WormBase=WBGene00016058|UniProtKB=G5EG23 | ||||
family | PTHR35375 | |||||
NCBI | gene | 259569 | ||||
RefSeq | protein | NM_068329.5 | ||||
TREEFAM | TREEFAM_ID | TF319437 | ||||
TrEMBL | UniProtAcc | G5EG23 | ||||
UniProt_GCRP | UniProtAcc | G5EG23 | ||||
Species | Caenorhabditis elegans | |||||
History | Version_change (2) | |||||
Status | Live | |||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | nspd | |||||
Allele | WBVar01499754 | |||||
WBVar01499395 | ||||||
WBVar01499396 | ||||||
WBVar01894107 | ||||||
WBVar01894108 | ||||||
WBVar01499242 | ||||||
WBVar01499633 | ||||||
WBVar01500245 | ||||||
RNASeq_FPKM (74) | ||||||
Ortholog (85) | ||||||
Paralog | WBGene00010633 | Caenorhabditis elegans | From_analysis | Panther | ||
WormBase-Compara | ||||||
WBGene00012781 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
WBGene00017808 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
WBGene00017386 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
WBGene00022754 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
WBGene00021280 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
WBGene00020860 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | ||||||
WBGene00020715 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00043147 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Structured_description | Automated_description | Enriched in several structures, including amphid sheath cell; intestine; muscle cell; neurons; and sperm based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and age-1 based on microarray and RNA-seq studies. Is affected by twenty-seven chemicals including Ethanol; methylmercury hydroxide; and methylmercuric chloride based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF780, Caenorhabditis species and Caenorhabditis elegans protein of unknown function (DUF780). | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | C24D10.7 | ||||
Corresponding_transcript | C24D10.7.1 | |||||
Other_sequence | CRC01200_1 | |||||
CR01622 | ||||||
Associated_feature | WBsf230063 | |||||
Experimental_info | RNAi_result | WBRNAi00041089 | Inferred_automatically | RNAi_primary | ||
WBRNAi00011109 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00011108 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00041090 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00022616 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1017312 | |||||
Expr1145125 | ||||||
Expr2014480 | ||||||
Expr2032719 | ||||||
Drives_construct | WBCnstr00028355 | |||||
Construct_product | WBCnstr00028355 | |||||
Microarray_results (22) | ||||||
Expression_cluster (215) | ||||||
Interaction (211) | ||||||
Map_info | Map | IV | Position | 1.53533 | ||
Positive | Positive_clone | C24D10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |