WormBase Tree Display for Gene: WBGene00010633
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WBGene00010633 | SMap | S_parent | Sequence | K07F5 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | nspd-2 | Person_evidence | WBPerson1983 | |||
Sequence_name | K07F5.5 | ||||||
Molecular_name | K07F5.5 | ||||||
K07F5.5.1 | |||||||
CE06120 | |||||||
Other_name | CELE_K07F5.5 | Accession_evidence | NDB | BX284604 | |||
Public_name | nspd-2 | ||||||
DB_info | Database | AceView | gene | 4K609 | |||
WormQTL | gene | WBGene00010633 | |||||
WormFlux | gene | WBGene00010633 | |||||
NDB | locus_tag | CELE_K07F5.5 | |||||
Panther | gene | CAEEL|WormBase=WBGene00010633|UniProtKB=Q21293 | |||||
family | PTHR35375 | ||||||
NCBI | gene | 177831 | |||||
RefSeq | protein | NM_069362.6 | |||||
TREEFAM | TREEFAM_ID | TF319437 | |||||
TrEMBL | UniProtAcc | Q21293 | |||||
UniProt_GCRP | UniProtAcc | Q21293 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | nspd | ||||||
Allele | WBVar01500079 | ||||||
WBVar00934287 | |||||||
WBVar01498996 | |||||||
WBVar01499925 | |||||||
WBVar01499770 | |||||||
WBVar01499771 | |||||||
WBVar02123820 | |||||||
WBVar01500038 | |||||||
WBVar01500039 | |||||||
WBVar01500245 | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (87) | |||||||
Paralog | WBGene00017808 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00017386 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00020715 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
WormBase-Compara | |||||||
WBGene00012781 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00043147 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
WormBase-Compara | |||||||
WBGene00020860 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00021280 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00022754 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Inparanoid_8 | |||||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00016058 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
Structured_description | Automated_description | Enriched in amphid sheath cell; germline precursor cell; intestine; sperm; and in male based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; age-1; and dpy-10 based on microarray and RNA-seq studies. Is affected by twenty-eight chemicals including Ethanol; methylmercury hydroxide; and 1-methylnicotinamide based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF780, Caenorhabditis species and Caenorhabditis elegans protein of unknown function (DUF780). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | K07F5.5 | |||||
Corresponding_transcript | K07F5.5.1 | ||||||
Other_sequence | CBC16605_1 | ||||||
CRC11671_1 | |||||||
PPC05096_1 | |||||||
CJC12464_1 | |||||||
PP02027 | |||||||
Associated_feature | WBsf228886 | ||||||
Experimental_info (7) | |||||||
Map_info | Map | IV | Position | 4.43268 | |||
Positive | Positive_clone | K07F5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |