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WormBase Tree Display for Gene: WBGene00003997

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Name Class

WBGene00003997SMapS_parentSequenceCHROMOSOME_X
IdentityVersion1
NameCGC_namepgp-3Person_evidenceWBPerson490
Sequence_nameZK455.7
Molecular_nameZK455.7
ZK455.7.1
CE03818
Other_namecepgpCAccession_evidenceEMBLX65055
CELE_ZK455.7Accession_evidenceNDBBX284606
Public_namepgp-3
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:33WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpgp
Allele (77)
Legacy_information[C.elegansII] pk18 : deletion derived from pk30tci, increased sensitivity to colchicine and to chloroquine; gross phenotype WT. Cloned: encodes 1254 aa P-glycoprotein, 61-65% identical to mammalian P-glycoproteins. Transcripts present throughout development; pgp-1:lacZ expressed in intestine, throughout development. Tagged PGP-3 detected in apical membranes of gut and of excretory cell. [Broeks et al. 1995; NL]
StrainWBStrain00028887
WBStrain00028888
WBStrain00028891
WBStrain00033025
WBStrain00037266
WBStrain00004731
RNASeq_FPKM (74)
GO_annotation (21)
Ortholog (71)
ParalogWBGene00001811Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001812Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001813Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001814Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001815Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001816Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001817Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001818Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001819Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003995Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003998Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00004003Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00004002Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00004001Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003999Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00004000Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00004004Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00004006Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00004007Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00004008Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00004005Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00022281Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003996Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_description (2)
Disease_infoPotential_model (41)
Molecular_infoCorresponding_CDSZK455.7
Corresponding_transcriptZK455.7.1
Other_sequence (21)
Associated_featureWBsf1006975
Experimental_infoRNAi_resultWBRNAi00059437Inferred_automaticallyRNAi_primary
WBRNAi00022018Inferred_automaticallyRNAi_primary
WBRNAi00014821Inferred_automaticallyRNAi_primary
WBRNAi00001488Inferred_automaticallyRNAi_primary
Expr_pattern (13)
Drives_constructWBCnstr00002142
WBCnstr00010331
WBCnstr00011338
WBCnstr00011339
WBCnstr00012125
WBCnstr00012126
WBCnstr00012634
WBCnstr00015310
WBCnstr00035753
Construct_productWBCnstr00012634
WBCnstr00014565
WBCnstr00014566
WBCnstr00035753
AntibodyWBAntibody00000095
Microarray_results (17)
Expression_cluster (180)
Interaction (34)
Map_infoMapXPosition3.16596Error0.03869
PositivePositive_clonePB#CPG4
ZK455Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (46)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene