WormBase Tree Display for Gene: WBGene00001813
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| WBGene00001813 | SMap | S_parent | Sequence | F57A10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | haf-3 | Person_evidence | WBPerson36 | |||||
| Sequence_name | F57A10.3 | ||||||||
| Molecular_name | F57A10.3 | ||||||||
| F57A10.3.1 | |||||||||
| CE41666 | |||||||||
| Other_name | CELE_F57A10.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | haf-3 | ||||||||
| DB_info | Database | AceView | gene | 5Q242 | |||||
| WormQTL | gene | WBGene00001813 | |||||||
| WormFlux | gene | WBGene00001813 | |||||||
| NDB | locus_tag | CELE_F57A10.3 | |||||||
| NCBI | gene | 180056 | |||||||
| RefSeq | protein | NM_074526.8 | |||||||
| TREEFAM | TREEFAM_ID | TF105198 | |||||||
| TrEMBL | UniProtAcc | O17895 | |||||||
| UniProt_GCRP | UniProtAcc | O17895 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:25 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | haf | ||||||||
| Allele (208) | |||||||||
| Strain | WBStrain00031811 | ||||||||
| WBStrain00036397 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (37) | |||||||||
| Paralog (23) | |||||||||
| Structured_description | Concise_description | haf-3 encodes a member of the ABC transporter family with highest similarity to human ABCB10. | Curator_confirmed | WBPerson48 | |||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable ATPase-coupled transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Expressed in intestine and spermatheca. Is an ortholog of human ABCB10 (ATP binding cassette subfamily B member 10). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F57A10.3 | |||||||
| Corresponding_CDS_history | F57A10.3:wp183 | ||||||||
| Corresponding_transcript | F57A10.3.1 | ||||||||
| Other_sequence (27) | |||||||||
| Associated_feature | WBsf653463 | ||||||||
| WBsf982061 | |||||||||
| WBsf1002346 | |||||||||
| WBsf1021058 | |||||||||
| WBsf235083 | |||||||||
| WBsf235084 | |||||||||
| WBsf235085 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00033564 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00048797 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015858 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr3354 | ||||||||
| Expr1027110 | |||||||||
| Expr1031062 | |||||||||
| Expr1152549 | |||||||||
| Expr2012357 | |||||||||
| Expr2030593 | |||||||||
| Drives_construct | WBCnstr00011351 | ||||||||
| WBCnstr00036671 | |||||||||
| Construct_product | WBCnstr00036671 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (116) | |||||||||
| Interaction (28) | |||||||||
| Map_info | Map | V | Position | 8.73983 | Error | 0.016188 | |||
| Positive | Positive_clone | F57A10 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 5006 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027644 | ||||||||
| WBPaper00028961 | |||||||||
| WBPaper00028970 | |||||||||
| WBPaper00031484 | |||||||||
| WBPaper00035985 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041340 | |||||||||
| WBPaper00049307 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Sequence connection from Sheps JA and Baillie DL [021008 ck1] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
