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WormBase Tree Display for Gene: WBGene00057039

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Name Class

WBGene00057039SMapS_parentSequenceCrem_Contig2
IdentityVersion2
NameSequence_nameCRE08982
Molecular_nameCRE08982
CRE08982.1
RP06189
Other_namecr01.sctg7.wum.530
Public_nameCRE08982
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
203 Jul 2008 11:45:08WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE08982
Other_namecr01.sctg7.wum.530
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000041.05588From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
1.25855From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
1.46122From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (36)
WBls:00000270.863334From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
1.072From_analysisRNASeq.remanei.WBls:0000027.control_median
1.2567From_analysisRNASeq.remanei.WBls:0000027.control_mean
1.28067From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
2.88278From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:00000380.178117From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
1.49461From_analysisRNASeq.remanei.WBls:0000038.control_mean
1.854From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
2.45172From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:000004114.8614From_analysisRNASeq.remanei.WBls:0000041.control_median
14.9878From_analysisRNASeq.remanei.WBls:0000041.control_mean
23.2536From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
23.459From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
24.6516From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
5.97553From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
6.11784From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
6.46921From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
WBls:0000063 (11)
WBls:00001012.38433From_analysisRNASeq.remanei.total_over_all_stages.control_median
4.75277From_analysisRNASeq.remanei.total_over_all_stages.control_mean
OrthologWBGene00008352Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00008618Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00008632Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00010018Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00013610Caenorhabditis elegansFrom_analysisTreeFam
WBGene00013838Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00016525Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00016527Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00017962Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00018690Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00018803Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00020637Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00020638Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00020639Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00021864Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00022321Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00022324Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00022325Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00022332Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00022333Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00022477Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00022478Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00022484Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00022485Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00044402Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00044672Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00044676Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00194735Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00206486Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00156997Caenorhabditis brenneriFrom_analysisOMA
WBGene00158951Caenorhabditis brenneriFrom_analysisOMA
WBGene00145258Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00159144Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00147895Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00145373Caenorhabditis brenneriFrom_analysisOMA
Cnig_chr_V.g21281Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g17992Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_02218.g25477Caenorhabditis sinicaFrom_analysisWormBase-Compara
chrV_pilon.g17512Caenorhabditis elegansFrom_analysisWormBase-Compara
Paralog (360)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: F-box A protein FB155/FB224; F-box-like domain superfamily; Mos1 transposase, HTH domain; HTH domain in Mos1 transposase; F-box domain; and Leucine-rich repeat domain superfamily. Is an ortholog of C. elegans fbxa-24; fbxa-72; and fbxa-69.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE08982
Corresponding_transcriptCRE08982.1
Other_sequenceCBC02909_1
MethodGene