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WormBase Tree Display for Gene: WBGene00043147

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Name Class

WBGene00043147SMapS_parentSequenceC24D10
IdentityVersion3
NameCGC_namenspd-6Person_evidenceWBPerson1983
Sequence_nameC24D10.8
Molecular_nameC24D10.8
C24D10.8.1
CE16879
Other_nameCELE_C24D10.8Accession_evidenceNDBBX284604
Public_namenspd-6
DB_infoDatabaseWormQTLgeneWBGene00043147
WormFluxgeneWBGene00043147
NDBlocus_tagCELE_C24D10.8
NCBIgene4926899
RefSeqproteinNM_001083195.3
TREEFAMTREEFAM_IDTF319437
TrEMBLUniProtAccG5EG23
UniProt_GCRPUniProtAccG5EG23
SpeciesCaenorhabditis elegans
HistoryVersion_change104 Oct 2004 10:58:09WBPerson1971EventCreated
Killed
203 Oct 2006 09:35:28WBPerson1849EventResurrected
303 Oct 2006 09:54:23WBPerson2970Name_changeCGC_namenspd-6
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnspd
AlleleWBVar01499754
WBVar01499395
WBVar01499396
WBVar01499242
WBVar01499633
WBVar01515756
WBVar01500245
WBVar00297427
RNASeq_FPKM (74)
OrthologWBGene00037331Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00039798Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00057463Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00057292Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00058098Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WBGene00132634Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00134984Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00137025Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00141340Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00154820Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00063307Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00129669Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00158606Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00162485Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WBGene00157609Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00206737Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00209397Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00214546Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00127116Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00212157Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00218217Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00057476Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00056605Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00070580Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00061696Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00051079Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
CSP21.g13650Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g8999Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g1026Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g11233Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g8784Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g19809Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g11611Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g18488Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g3744Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g8802Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g10189Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g16963Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g18304Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g19427Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g21288Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g25927Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g4282Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g6652Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g954Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g10573Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g10620Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g12081Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g5804Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g5908Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g1422Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g16779Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g20346Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g20347Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g5982Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g19813Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g5128Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g5708Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00071.g3405Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00392.g10200Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00978.g15206Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_15316.g24995Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_II.g4453Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g4456Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g6835Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_II.g7198Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g11213Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold630.g17139Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00474.g11836Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_04402Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_05955Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_05967Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_13089Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_005908Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_005922Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_006111Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_011090Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_011095Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_019920Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_023075Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_025061Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_026048Caenorhabditis remaneiFrom_analysisWormBase-Compara
Sp34_30021400Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIV_pilon.g10365Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00010633Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00012781Caenorhabditis elegansFrom_analysisInparanoid_8
WormBase-Compara
WBGene00017386Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00017808Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00020715Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00020860Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00021280Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00022754Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00016058Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in amphid sheath cell; germ line; intestine; sperm; and in male based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and dpy-10 based on microarray and RNA-seq studies. Is affected by twenty-four chemicals including Ethanol; methylmercury hydroxide; and manganese chloride based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF780, Caenorhabditis species and Caenorhabditis elegans protein of unknown function (DUF780).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC24D10.8
Corresponding_CDS_historyC24D10.8:wp122
Corresponding_transcriptC24D10.8.1
Other_sequenceCBC05875_1
CR00100
CJC01067_1
Associated_feature (2)
Experimental_infoRNAi_resultWBRNAi00041089Inferred_automaticallyRNAi_primary
WBRNAi00011109Inferred_automaticallyRNAi_primary
WBRNAi00011108Inferred_automaticallyRNAi_primary
WBRNAi00041090Inferred_automaticallyRNAi_primary
Expr_patternExpr1145126
Expr2014483
Expr2032722
Drives_constructWBCnstr00023825
Construct_productWBCnstr00023825
Microarray_resultsSMD_C24D10.8
171880_x_at
172527_x_at
172569_x_at
A_12_P142110
Aff_C24D10.8
GPL19516_CGZ0005724
GPL21109_C24D10.8
GPL3518_CE16879
GPL8304_CE_WBGene00043147_A
Expression_cluster (176)
Map_infoMapIVPosition1.53696
PositivePositive_cloneC24D10Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkThe corresponding CDS object for this gene had been created and removed before WormBase introduced the concept of unique gene identifiers. This (dead) gene object exists as an attempt to make sure that a gene ID exists for every worm gene prediction that has ever existed.Curator_confirmedWBPerson1971
[050610 pad] Automatic assignment of Sequence_name connection using info taken from Public_name tags.
Resurrected due to close similarity to other elegans genes.Curator_confirmedWBPerson1849
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene