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WormBase Tree Display for Gene: WBGene00001615

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Name Class

WBGene00001615SMapS_parentSequenceC06A8
IdentityVersion1
NameCGC_nameglr-4Person_evidenceWBPerson42
Sequence_nameC06A8.9
Molecular_nameC06A8.9a
C06A8.9a.1
CE31294
C06A8.9b
CE43965
C06A8.9b.1
Other_nameCELE_C06A8.9Accession_evidenceNDBBX284602
Public_nameglr-4
DB_infoDatabaseAceViewgene2I76
WormQTLgeneWBGene00001615
WormFluxgeneWBGene00001615
NDBlocus_tagCELE_C06A8.9
PanthergeneCAEEL|WormBase=WBGene00001615|UniProtKB=Q17697
familyPTHR18966
NCBIgene174258
RefSeqproteinNM_001373747.3
NM_001267197.2
TrEMBLUniProtAccQ17697
H2KY73
UniProt_GCRPUniProtAccQ17697
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:25WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classglr
Allele (110)
StrainWBStrain00029777
RNASeq_FPKM (74)
GO_annotation (15)
OrthologWBGene00057688Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00033807Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00158982Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00126939Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00190741Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00192307Caenorhabditis brenneriFrom_analysisWormBase-Compara
CBOVI.g12451Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g12453Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g4696Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g9322Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g9324Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g14634Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g14636Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g20122Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g20124Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g9692Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g9694Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g4434Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g4437Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g270Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g274Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g14108Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g23657Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g17097Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_02404.g17151Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-glr-4Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold504.g2399Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00159.g5918Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00159.g5920Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_06945Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_005705Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_005707Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g09312Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g09314Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g10957Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20145310Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g5099Caenorhabditis elegansFrom_analysisWormBase-Compara
chrII_pilon.g5101Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00097735Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00267070Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00267072Strongyloides rattiFrom_analysisWormBase-Compara
FB:FBgn0046113Drosophila melanogasterFrom_analysisOrthoFinder
Panther
FB:FBgn0004620Drosophila melanogasterFrom_analysisOrthoFinder
Panther
FB:FBgn0020429Drosophila melanogasterFrom_analysisOrthoFinder
Panther
FB:FBgn0028422Drosophila melanogasterFrom_analysisOrthoFinder
Panther
FB:FBgn0051201Drosophila melanogasterFrom_analysisOrthoFinder
Panther
ZFIN:ZDB-GENE-070821-5Danio rerioFrom_analysisOMA
OrthoFinder
Panther
HGNC:4582Homo sapiensFrom_analysisOMA
OrthoFinder
Panther
RGD:2734Rattus norvegicusFrom_analysisOMA
OrthoFinder
Panther
ParalogWBGene00001612Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001613Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001614Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001618Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001619Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001617Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001616Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00003774Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00003775Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00012190Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionglr-4 encodes a putative non-NMDA ionotropic glutamate receptor subunit,most closely related to GLR-3 and less so to GLR-7, possibly of thekainate subfamily; glr-4 is expressed in various sensory neurons andinterneurons from embyrogenesis onward; glr-4 expression requires UNC-42,as well as CFI-1 in URA cells.Paper_evidenceWBPaper00004529
WBPaper00004567
WBPaper00005226
Curator_confirmedWBPerson567
Date_last_updated23 Aug 2006 00:00:00
Automated_descriptionPredicted to enable glutamate receptor activity and transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential. Predicted to be involved in glutamatergic synaptic transmission and modulation of chemical synaptic transmission. Predicted to be located in postsynaptic density membrane. Expressed in cholinergic neurons and head neurons. Is an ortholog of human GRIK4 (glutamate ionotropic receptor kainate type subunit 4).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC06A8.9a
C06A8.9b
Corresponding_CDS_historyC06A8.9:wp81
Corresponding_transcriptC06A8.9a.1
C06A8.9b.1
Other_sequenceJI182754.1
Dviv_isotig08614
JI216667.1
Dviv_isotig08613
Acan_isotig13644
Dviv_isotig08611
JI228154.1
Associated_feature (21)
Experimental_info (7)
Map_infoMapIIPosition0.565045Error0.000386
PositivePositive_cloneC06A8Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
Reference (31)
RemarkSequence connection based on email from [Petcherski A] krb 02/04/05
Note that C06A8.10 was merged into the C06A8.9 gene prediction. 02/06/11 krb.
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene