WormBase Tree Display for Gene: WBGene00021236
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WBGene00021236 | SMap | S_parent | Sequence | Y19D10B | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | pud | |||||
Allele (20) | ||||||
RNASeq_FPKM (74) | ||||||
Ortholog (14) | ||||||
Paralog | WBGene00017490 | Caenorhabditis elegans | From_analysis | TreeFam | ||
WBGene00017498 | Caenorhabditis elegans | From_analysis | TreeFam | |||
WBGene00017499 | Caenorhabditis elegans | From_analysis (2) | ||||
WBGene00017500 | Caenorhabditis elegans | From_analysis | TreeFam | |||
WBGene00017501 | Caenorhabditis elegans | From_analysis | TreeFam | |||
WBGene00044489 | Caenorhabditis elegans | From_analysis | TreeFam | |||
WBGene00044490 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Structured_description | Concise_description | PUD-1.2, along with PUD-1.1, encodes a protein (CE25224) of unknown function; the PUD-1.2/PUD-1.1 proteins are present at significantly higher levels in daf-2 mutant vs. wild-type adults during a temperature shift from 15 to 25 degrees C; pud-1.2(RNAi) animals have no obvious mutant phenotype (i. e., they have no obvious defect in fertility or germline maintenance); the PUD-1.2/PUD-1.1 proteins belong to a nematode-specific family including the paralogs PUD-2.1, PUD-2.2, PUD-3, and PUD-4. | Paper_evidence | WBPaper00030894 | ||
Curator_confirmed | WBPerson1843 | |||||
Date_last_updated | 12 Jun 2015 00:00:00 | |||||
Automated_description | Expressed in hypodermis and intestine. Is predicted to encode a protein with the following domains: Up-Regulated in long-lived daf-2 and Up-regulated in Daf-2. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | Y19D10B.7 | ||||
Corresponding_transcript | Y19D10B.7.1 | |||||
Other_sequence | CBC06145_1 | |||||
Associated_feature | WBsf233409 | |||||
Experimental_info | RNAi_result | WBRNAi00044733 | Inferred_automatically | RNAi_primary | ||
WBRNAi00036705 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00044732 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr11080 | |||||
Expr1159169 | ||||||
Expr2015178 | ||||||
Drives_construct | WBCnstr00017876 | |||||
WBCnstr00017880 | ||||||
WBCnstr00017882 | ||||||
WBCnstr00018112 | ||||||
WBCnstr00024611 | ||||||
Construct_product | WBCnstr00017876 | |||||
WBCnstr00017878 | ||||||
WBCnstr00017880 | ||||||
WBCnstr00017882 | ||||||
WBCnstr00018112 | ||||||
WBCnstr00024611 | ||||||
Antibody | WBAntibody00001282 | |||||
Microarray_results | 177131_s_at | |||||
A_12_P106518 | ||||||
A_12_P155855 | ||||||
GPL13394_WBGene00021236 | ||||||
GPL13914_Y19D10B.7 | ||||||
GPL14144_F15E11.13_398-457_0.939_3_A | ||||||
GPL19516_CGZ0016503 | ||||||
GPL19516_CGZ0043454 | ||||||
GPL21109_F15E11.13 | ||||||
GPL3518_CE25224 | ||||||
GPL8304_CE_WBGene00017499_A | ||||||
GPL8304_CE_WBGene00021236_A | ||||||
GPL8673_F15E11_13P00079 | ||||||
GPL8673_F15E11_13P00083 | ||||||
GPL8673_F15E11_13P00308 | ||||||
GPL8673_Y19D10B_7P00079 | ||||||
GPL8673_Y19D10B_7P00083 | ||||||
GPL8673_Y19D10B_7P00308 | ||||||
Expression_cluster (276) | ||||||
Interaction (14) | ||||||
Map_info | Map | V | Position | -14.8764 | ||
Positive | Positive_clone | Y19D10B | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Reference | WBPaper00024325 | |||||
WBPaper00030894 | ||||||
WBPaper00037428 | ||||||
WBPaper00065331 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |