WormBase Tree Display for Gene: WBGene00003104
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| WBGene00003104 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | ZC13 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | mab-7 | Person_evidence | WBPerson261 | |||||
| Sequence_name | ZC13.4 | ||||||||
| Molecular_name | ZC13.4 | ||||||||
| ZC13.4.1 | |||||||||
| CE41485 | |||||||||
| Other_name | CELE_ZC13.4 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | mab-7 | ||||||||
| DB_info | Database | AceView | gene | XB510 | |||||
| WormQTL | gene | WBGene00003104 | |||||||
| WormFlux | gene | WBGene00003104 | |||||||
| NDB | locus_tag | CELE_ZC13.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00003104|UniProtKB=Q95Q39 | |||||||
| family | PTHR15854 | ||||||||
| NCBI | gene | 180440 | |||||||
| RefSeq | protein | NM_075773.6 | |||||||
| SwissProt | UniProtAcc | Q95Q39 | |||||||
| TREEFAM | TREEFAM_ID | TF315956 | |||||||
| UniProt_GCRP | UniProtAcc | Q95Q39 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:30 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mab | ||||||||
| Reference_allele | WBVar00144142 | Paper_evidence | WBPaper00031131 | ||||||
| Allele (89) | |||||||||
| Legacy_information | e1599 : adult male slightly small all bursal rays swollen bursal fan reduced. ES2 ME1. Hermaphrodite slightly dumpy. ES2. NA1. | ||||||||
| See also e1599, e2150 | |||||||||
| [C.elegansII] e1599 : adult male slightly small, all bursal rays swollen; bursal fan reduced. ES2 ME1. Hermaphrodite slightly dumpy. ES2. OA1: e2150. [Hodgkin 1983a; Link et al. 1988; CB] | |||||||||
| Strain | WBStrain00004469 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00088162 | ||||||||
| 00088163 | |||||||||
| 00088164 | |||||||||
| Ortholog (27) | |||||||||
| Paralog | WBGene00016196 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015794 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00012143 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00008260 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00008993 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00012917 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00044557 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | mab-7 encodes a protein with a hydrophobic type II transmembrane region at the N-terminus, an EGF-like motif, a ShKT motif and a long C-terminus; mab-7 is involved in morphogenesis of the male tail, specifically affecting the structural cells, neuronal processes and the hypodermal sheath of the sensory rays, as such, it affects mating in males; a mab-7 promoter-gfp construct is expressed in hypodermis, body seam, ray structural cells, and several neurons in the head and tail region. | Paper_evidence | WBPaper00000608 | |||||
| WBPaper00018149 | |||||||||
| WBPaper00019593 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 23 Sep 2004 00:00:00 | ||||||||
| Automated_description | Predicted to be located in plasma membrane. Expressed in PQR; hypodermis; and vulva. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZC13.4 | |||||||
| Corresponding_CDS_history | ZC13.4:wp179 | ||||||||
| Corresponding_transcript | ZC13.4.1 | ||||||||
| Other_sequence (46) | |||||||||
| Associated_feature | WBsf653674 | ||||||||
| WBsf670091 | |||||||||
| WBsf670092 | |||||||||
| WBsf670093 | |||||||||
| WBsf670094 | |||||||||
| WBsf1003888 | |||||||||
| WBsf1003889 | |||||||||
| WBsf1022186 | |||||||||
| WBsf236976 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00058728 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00075437 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00037949 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021562 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr3835 | ||||||||
| Expr7804 | |||||||||
| Expr1024313 | |||||||||
| Expr1031468 | |||||||||
| Expr1162150 | |||||||||
| Expr2013329 | |||||||||
| Expr2031561 | |||||||||
| Drives_construct | WBCnstr00011686 | ||||||||
| WBCnstr00012937 | |||||||||
| WBCnstr00036227 | |||||||||
| Construct_product | WBCnstr00011686 | ||||||||
| WBCnstr00036227 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (235) | |||||||||
| Interaction (189) | |||||||||
| Map_info | Map | X | Position | -19.4554 | Error | 0.08561 | |||
| Well_ordered | |||||||||
| Positive | Positive_clone | ZC13 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | 2_point | 627 | |||||||
| Multi_point | 353 | ||||||||
| 354 | |||||||||
| 1857 | |||||||||
| 5067 | |||||||||
| Pos_neg_data | 5456 | ||||||||
| 5462 | |||||||||
| 5467 | |||||||||
| 5471 | |||||||||
| 5475 | |||||||||
| 5479 | |||||||||
| 5483 | |||||||||
| 5487 | |||||||||
| 5491 | |||||||||
| 5495 | |||||||||
| Reference (19) | |||||||||
| Remark | Sequence connection from [Tsang SW] | ||||||||
| Method | Gene |
