WormBase Tree Display for Gene: WBGene00008993

WBGene00008993 SMap: S_parent: Sequence: F21A3
  Identity: Version: 1
    Name: Sequence_name: F21A3.3
      Molecular_name: F21A3.3
        F21A3.3.1
        CE40043
      Other_name: CELE_F21A3.3 Accession_evidence: NDB BX284605
      Public_name: F21A3.3
    DB_info: Database: AceView gene 5P995
        WormQTL gene WBGene00008993
        WormFlux gene WBGene00008993
        NDB locus_tag CELE_F21A3.3
        Panther gene CAEEL|WormBase=WBGene00008993|UniProtKB=O17829
          family PTHR15854
        NCBI gene 184748
        RefSeq protein NM_074461.5
        TREEFAM TREEFAM_ID TF315956
        TrEMBL UniProtAcc O17829
        UniProt_GCRP UniProtAcc O17829
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (38)
    RNASeq_FPKM (74)
    Ortholog (25)
    Paralog: WBGene00003104 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00008260 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00016196 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00015794 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00012143 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00012917 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00044557 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: F21A3.3 encodes a putatively secreted protein, with an N-terminalEGF-liked domain and a DUF1794 domain, that is homologous to humanTHAP4/CGI-36; F21A3.3 is a paralog of MAB-7, C15F1.1, C28H8.5, C52G5.2,T28H10.2, and a domain in Y46G5A.29. Paper_evidence: WBPaper00004133
            WBPaper00028842
          Curator_confirmed: WBPerson567
          Date_last_updated: 11 Dec 2006 00:00:00
      Automated_description: Enriched in several structures, including ABplppppaa; AFD; interfacial epithelial cell; rectal gland cell; and somatic gonad precursor based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on tiling array; RNA-seq; and microarray studies. Is affected by thirteen chemicals including rotenone; D-glucose; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: ShK domain-like; Calycin; ShKT domain; THAP4-like, heme-binding beta-barrel domain; and Nitrobindin family. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F21A3.3
    Corresponding_CDS_history: F21A3.3:wp156
    Corresponding_transcript: F21A3.3.1
    Other_sequence (13)
    Associated_feature: WBsf647598
      WBsf647599
      WBsf647600
      WBsf233035
  Experimental_info: RNAi_result: WBRNAi00045162 Inferred_automatically: RNAi_primary
      WBRNAi00031198 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1025703
      Expr1033915
      Expr1149100
      Expr2002804
      Expr2021021
    Drives_construct: WBCnstr00032539
    Construct_product: WBCnstr00032539
    Microarray_results (19)
    Expression_cluster (170)
    Interaction: WBInteraction000282971
      WBInteraction000306535
      WBInteraction000327177
      WBInteraction000392600
  Map_info: Positive: Positive_clone: F21A3 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 8.32924
  Method: Gene