WormBase Tree Display for Gene: WBGene00012143
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WBGene00012143 | SMap | S_parent | Sequence | T28H10 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | T28H10.2 | |||||||
Molecular_name | T28H10.2 | ||||||||
T28H10.2.1 | |||||||||
CE41031 | |||||||||
Other_name | CELE_T28H10.2 | Accession_evidence | NDB | BX284605 | |||||
Public_name | T28H10.2 | ||||||||
DB_info | Database | AceView | gene | 5M990 | |||||
WormQTL | gene | WBGene00012143 | |||||||
WormFlux | gene | WBGene00012143 | |||||||
NDB | locus_tag | CELE_T28H10.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00012143|UniProtKB=Q22857 | |||||||
family | PTHR15854 | ||||||||
NCBI | gene | 189062 | |||||||
RefSeq | protein | NM_073735.6 | |||||||
TREEFAM | TREEFAM_ID | TF315956 | |||||||
TrEMBL | UniProtAcc | Q22857 | |||||||
UniProt_GCRP | UniProtAcc | Q22857 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (41) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (24) | |||||||||
Paralog | WBGene00003104 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00008260 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00008993 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00016196 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00015794 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00012917 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00044557 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Enriched in hypodermis; muscle cell; and sensory neurons based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by seventeen chemicals including methylmercuric chloride; D-glucose; and Psoralens based on microarray and RNA-seq studies. Human THAP4 enables several functions, including heme binding activity; identical protein binding activity; and peroxynitrite isomerase activity. Is predicted to encode a protein with the following domains: ShK domain-like; Calycin; ShKT domain; THAP4-like, heme-binding beta-barrel domain; and Nitrobindin family. Is an ortholog of human THAP4 (THAP domain containing 4). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T28H10.2 | |||||||
Corresponding_CDS_history | T28H10.2:wp175 | ||||||||
Corresponding_transcript | T28H10.2.1 | ||||||||
Other_sequence | CJC16163_1 | ||||||||
Associated_feature | WBsf653227 | ||||||||
WBsf669512 | |||||||||
WBsf234689 | |||||||||
WBsf234690 | |||||||||
Experimental_info | RNAi_result | WBRNAi00019416 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00054447 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00036106 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1027593 | ||||||||
Expr1157991 | |||||||||
Expr2006637 | |||||||||
Expr2024854 | |||||||||
Drives_construct | WBCnstr00030109 | ||||||||
Construct_product | WBCnstr00030109 | ||||||||
Microarray_results (23) | |||||||||
Expression_cluster (171) | |||||||||
Interaction | WBInteraction000032323 | ||||||||
WBInteraction000335156 | |||||||||
WBInteraction000369055 | |||||||||
WBInteraction000369066 | |||||||||
WBInteraction000435239 | |||||||||
WBInteraction000439234 | |||||||||
WBInteraction000467838 | |||||||||
WBInteraction000585598 | |||||||||
Map_info | Positive | Positive_clone | T28H10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | 4.43285 | |||||||
Reference | WBPaper00031003 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
Method | Gene |