WormBase Tree Display for Gene: WBGene00004925
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WBGene00004925 | Evidence | Person_evidence | WBPerson508 | ||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | R12A1 | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | snt | ||||||
Allele (363) | |||||||
Strain | WBStrain00033077 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00001090 | ||||||
00001091 | |||||||
00001092 | |||||||
00001093 | |||||||
00001094 | |||||||
00001095 | |||||||
00001096 | |||||||
00001097 | |||||||
00001098 | |||||||
00001099 | |||||||
00001100 | |||||||
00001101 | |||||||
00001102 | |||||||
00001103 | |||||||
00001104 | |||||||
00028495 | |||||||
00113334 | |||||||
Ortholog (60) | |||||||
Paralog | WBGene00004921 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
WBGene00004922 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00004923 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00004924 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00004926 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00011682 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00004316 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00006306 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00020861 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Automated_description | Predicted to enable several functions, including SNARE binding activity; calcium ion binding activity; and phospholipid binding activity. Predicted to be involved in cellular response to calcium ion; regulation of secretion by cell; and vesicle-mediated transport. Predicted to be located in several cellular components, including axon; exocytic vesicle; and synapse. Is an ortholog of several human genes including SYT3 (synaptotagmin 3); SYT6 (synaptotagmin 6); and SYT9 (synaptotagmin 9). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | R12A1.2a | |||||
R12A1.2b | |||||||
R12A1.2c | |||||||
R12A1.2d | |||||||
Corresponding_transcript | R12A1.2a.1 | ||||||
R12A1.2b.1 | |||||||
R12A1.2c.1 | |||||||
R12A1.2d.1 | |||||||
Other_sequence (28) | |||||||
Associated_feature | WBsf668760 | ||||||
WBsf718284 | |||||||
WBsf999320 | |||||||
WBsf999321 | |||||||
WBsf1019174 | |||||||
WBsf233331 | |||||||
Experimental_info | RNAi_result | WBRNAi00017785 | Inferred_automatically | RNAi_primary | |||
WBRNAi00112398 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00051825 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00095697 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00034876 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1010564 | ||||||
Expr1155484 | |||||||
Expr2015980 | |||||||
Expr2034215 | |||||||
Microarray_results (19) | |||||||
Expression_cluster (126) | |||||||
Interaction | WBInteraction000210718 | ||||||
WBInteraction000242791 | |||||||
WBInteraction000250599 | |||||||
WBInteraction000407493 | |||||||
WBInteraction000432274 | |||||||
WBInteraction000440448 | |||||||
WBInteraction000548592 | |||||||
Map_info | Map | V | Position | -19.0947 | Error | 0.071146 | |
Positive | Positive_clone | R12A1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00055090 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |