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WormBase Tree Display for Gene: WBGene00017179

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Name Class

WBGene00017179SMapS_parentSequenceF02E11
IdentityVersion2
NameCGC_namewht-4Person_evidenceWBPerson253
Sequence_nameF02E11.1
Molecular_nameF02E11.1
F02E11.1.1
CE50051
Other_nameCELE_F02E11.1Accession_evidenceNDBBX284602
Public_namewht-4
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:58WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
204 Jun 2007 15:54:19WBPerson2970Name_changeCGC_namewht-4
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classwht
Allele (90)
StrainWBStrain00031764
RNASeq_FPKM (74)
GO_annotation (12)
Ortholog (41)
ParalogWBGene00006522Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00007060Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00007513Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00007631Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008950Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012925Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00015479Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00016973Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00021535Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATPase-coupled transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be located in plasma membrane. Human ortholog(s) of this gene implicated in several diseases, including gout; hematologic cancer (multiple); and toxic encephalopathy. Is an ortholog of human ABCG1 (ATP binding cassette subfamily G member 1); ABCG2 (ATP binding cassette subfamily G member 2 (JR blood group)); and ABCG4 (ATP binding cassette subfamily G member 4).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:8552Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:74)
DOID:3602Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:74)
DOID:3459Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:74)
DOID:707Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:74)
DOID:4450Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:74)
DOID:9952Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:74)
DOID:8761Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:74)
DOID:13189Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:74)
DOID:9538Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:74)
DOID:9119Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:74)
Molecular_infoCorresponding_CDSF02E11.1
Corresponding_CDS_historyF02E11.1:wp124
F02E11.1:wp244
Corresponding_transcriptF02E11.1.1
Other_sequenceOden_isotig26129
JO470208.1
CRC10854_1
CBC00521_1
Dviv_isotig23481
JI169210.1
Associated_featureWBsf987193
WBsf987194
WBsf987195
WBsf987196
WBsf987197
WBsf1011866
WBsf1011867
WBsf1011868
Experimental_infoRNAi_resultWBRNAi00012779Inferred_automaticallyRNAi_primary
WBRNAi00043813Inferred_automaticallyRNAi_primary
Expr_patternExpr1017576
Expr1037387
Expr1147788
Expr2018065
Expr2036202
Drives_constructWBCnstr00027504
Construct_productWBCnstr00027504
Microarray_results (24)
Expression_clusterWBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
WBPaper00041954:ethanol_upregulated
WBPaper00042215:wdr-23(tm1817)_upregulated
WBPaper00042561:smgl-1(RNAi)_upregulated
WBPaper00044037:eat-2_upregulated
WBPaper00044316:CH3HgCl_7.5uM_upregulated
WBPaper00044736:rising_dev_expression
WBPaper00044760:germline_specific
WBPaper00045390:tunicamycin_upregulated
WBPaper00045521:Spermatogenic
WBPaper00046012:tdp-1(ok803)_downregulated
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
WBPaper00046805:csr-1(RNAi)_upregulated_Set1
WBPaper00046805:P-granule-RNAi_upregulated_Set1
WBPaper00048611:MnCl2_downregulated
WBPaper00049498:npr-1(ur89)_regulated_2
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049920:Glucose-Diet_upregulated_hyl-2(tm2031)
WBPaper00049920:Glucose-Diet_upregulated_N2
WBPaper00050080:rbr-2(tm3141)_downregulated
WBPaper00050231:male_enriched
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(OverExpression)_vs_N2_regulated_adult_20C
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00051404:alg-2(ok304)_downregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053295:lin-22(ot269)_downregulated
WBPaper00053318:Aging_downregulated_mRNA_N2
WBPaper00053318:mir-71(n4115)_downregulated_mRNA
WBPaper00053599:female_vs_male_downregulated
WBPaper00053657:JU2519_M.humicola-infection_24hr
WBPaper00053810:isp-1(qm150)_downregulated
WBPaper00054410:set-9(rw5)_downregulated
WBPaper00054493:hpl-2(tm1489)_upregulated
WBPaper00054872:egl-9(sa307)_downregulated
WBPaper00055013:hmg-3(bar24)_downregulated
WBPaper00055354:Rapamycin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055354:Rapamycin-Psora_upregulated
WBPaper00055386:daf-2(e1370)_upregulated
WBPaper00055386:eat-2(ad465)_upregulated
WBPaper00055648:sperm_expressed
WBPaper00055804:FBF-1-FBF-2-associated_spermatogenic-enriched
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055971:nhl-2(ok818)_20C_downregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056090:E.faecalis_upregulated_N2
WBPaper00056161:male_enriched_siRNA
WBPaper00056284:ints-1(RNAi)_upregulated
WBPaper00056290:hsp-6(mg585)_downregulated
WBPaper00056471:flcn-1(ok975)_downregulated
WBPaper00056809:smn-1(ok355)_downregulated
WBPaper00058598:spn-4(tm291)_downregulated
WBPaper00058948:npr-8(ok1439)_downregulated_OP50
WBPaper00058955:heatshock_upregulated_CE
WBPaper00059117:B.subtilis_upregulated
WBPaper00059728:5ug_cholesterol_upregulated
WBPaper00059728:20ug_cholesterol_upregulated
WBPaper00060014:set-2(zr2012)_upregulated
WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
WBPaper00060683:hlh-11(ko1)_upregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00060921:cat-2(e1112)_downregulated
WBPaper00061007:HB101_upregulated
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061081:E.faecalis_upregulated_N2
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061424:Diet_MYb131_upregulated
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061479:mep-1(ne4629)_upregulated
WBPaper00061479:prg-1(tm872)_upregulated
WBPaper00061527:Y40H4A.2-ZK1053.2
WBPaper00061753:csr-1(tor159)_downregulated_25C
WBPaper00061853:osm-3(dh441)_downregulated
WBPaper00062156:jmjd-5(zr1234)_upregulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00062456:doxycycline_upregulated_CB4856_transcript
WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064539:nhr-114(gk849)_downregulated
WBPaper00064716:paraquat_downregulated
WBPaper00064728:cpl-1(W32AY35A)_upregulated
WBPaper00064871:hypoxia_upregulated_F1
WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065096:npr-8(ok1439)_upregulated_Day10_20C
WBPaper00065096:npr-8(ok1439)_upregulated_Day10_25C
WBPaper00065749:Heat-Shock_upregulated_endu-2(tm4977)
WBPaper00065984:pals-17(syb3980)_upregulated
WBPaper00066038:mip-1(how5)_upregulated
WBPaper00066085:hda-3(ok1991)_upregulated
WBPaper00066093:E.coli-purE_upregulated
WBPaper00066110:Cisplatin_upregulated_diploid
WBPaper00066110:Doxorubicin_upregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00066118:cyclobutrifluram_upregulated
WBPaper00066232:ash-2(RNAi)_downregulated_WT
cgc4489_group_10
WBPaper00031252:AIN-1_IP_enriched
WBPaper00031252:AIN-2_IP_enriched
WBPaper00035873:dpy-10_regulated
WBPaper00036286:Pattern_E
WBPaper00038172:aak-2overexpression_up_regulated
WBPaper00038172:tax-6null_down_regulated
WBPaper00040210:Diazinon_24C_regulated
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_developing
WBPaper00045263:0.1mM-paraquat_downregulated
WBPaper00045263:isp-1(qm150)_downregulated
WBPaper00045263:nuo-6(qm200)_downregulated
WBPaper00045263:ProLongevity-mtROS_downregulated
WBPaper00045673:colistin_downregulated
WBPaper00046853:AOBr_M.aeruginosa-batch-culture_downregulated
WBPaper00048989:N2_rapamycin_upregulated
[cgc6390]:spermatogenesis-enriched
InteractionWBInteraction000114189
WBInteraction000114200
WBInteraction000114202
WBInteraction000114203
WBInteraction000123701
WBInteraction000214741
WBInteraction000447271
WBInteraction000448176
WBInteraction000453756
Map_infoMapIIPosition-7.0337Error0.033445
PositivePositive_cloneF02E11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00027644
WBPaper00031484
WBPaper00038491
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene