WormBase Tree Display for Gene: WBGene00012925
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| WBGene00012925 | SMap | S_parent | Sequence | Y47D3A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | wht-8 | Person_evidence | WBPerson253 | |||||
| Sequence_name | Y47D3A.11 | ||||||||
| Molecular_name | Y47D3A.11 | ||||||||
| Y47D3A.11.1 | |||||||||
| CE44357 | |||||||||
| Other_name | CELE_Y47D3A.11 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | wht-8 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 04 Jun 2007 15:54:19 | WBPerson2970 | Name_change | CGC_name | wht-8 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | wht | ||||||||
| Allele (62) | |||||||||
| Strain | WBStrain00032967 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (43) | |||||||||
| Paralog | WBGene00006522 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00007060 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00007513 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00007631 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00008950 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015479 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00017179 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021535 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00016973 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable ATPase-coupled transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be located in plasma membrane. Human ortholog(s) of this gene implicated in several diseases, including gout; hematologic cancer (multiple); and toxic encephalopathy. Is an ortholog of human ABCG2 (ATP binding cassette subfamily G member 2 (JR blood group)). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:8552 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||
| DOID:3602 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||||
| DOID:3459 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||||
| DOID:707 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||||
| DOID:4450 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||||
| DOID:9952 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||||
| DOID:8761 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||||
| DOID:13189 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||||
| DOID:9538 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||||
| DOID:9119 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||||
| Molecular_info | Corresponding_CDS | Y47D3A.11 | |||||||
| Corresponding_CDS_history | Y47D3A.11:wp210 | ||||||||
| Corresponding_transcript | Y47D3A.11.1 | ||||||||
| Other_sequence | JO468408.1 | ||||||||
| Dviv_isotig27884 | |||||||||
| DVC02508_1 | |||||||||
| Tcol_isotig17787 | |||||||||
| EV853208.1 | |||||||||
| Dviv_isotig18534 | |||||||||
| Dviv_isotig18533 | |||||||||
| Associated_feature | WBsf994303 | ||||||||
| WBsf994304 | |||||||||
| WBsf994305 | |||||||||
| WBsf994306 | |||||||||
| WBsf1015947 | |||||||||
| WBsf1015948 | |||||||||
| WBsf1015949 | |||||||||
| WBsf1015950 | |||||||||
| WBsf1015951 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00037153 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056730 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007090 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056729 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020696 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram637 | ||||||||
| Expr1023413 | |||||||||
| Expr1160197 | |||||||||
| Expr2036206 | |||||||||
| Drives_construct | WBCnstr00002852 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (149) | |||||||||
| Interaction (38) | |||||||||
| Map_info | Map | III | Position | 7.31108 | Error | 0.10177 | |||
| Positive | Positive_clone | Y47D3A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
