WormBase Tree Display for Gene: WBGene00017179
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| WBGene00017179 | SMap | S_parent | Sequence | F02E11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | wht-4 | Person_evidence | WBPerson253 | |||||
| Sequence_name | F02E11.1 | ||||||||
| Molecular_name | F02E11.1 | ||||||||
| F02E11.1.1 | |||||||||
| CE50051 | |||||||||
| Other_name | CELE_F02E11.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | wht-4 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 04 Jun 2007 15:54:19 | WBPerson2970 | Name_change | CGC_name | wht-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | wht | ||||||||
| Allele (90) | |||||||||
| Strain | WBStrain00031764 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (41) | |||||||||
| Paralog | WBGene00006522 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00007060 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00007513 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00007631 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00008950 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00012925 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015479 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00016973 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00021535 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable ATPase-coupled transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be located in plasma membrane. Human ortholog(s) of this gene implicated in several diseases, including gout; hematologic cancer (multiple); and toxic encephalopathy. Is an ortholog of human ABCG1 (ATP binding cassette subfamily G member 1); ABCG2 (ATP binding cassette subfamily G member 2 (JR blood group)); and ABCG4 (ATP binding cassette subfamily G member 4). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:8552 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||
| DOID:3602 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||||
| DOID:3459 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||||
| DOID:707 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||||
| DOID:4450 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||||
| DOID:9952 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||||
| DOID:8761 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||||
| DOID:13189 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||||
| DOID:9538 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||||
| DOID:9119 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:74) | ||||||
| Molecular_info | Corresponding_CDS | F02E11.1 | |||||||
| Corresponding_CDS_history | F02E11.1:wp124 | ||||||||
| F02E11.1:wp244 | |||||||||
| Corresponding_transcript | F02E11.1.1 | ||||||||
| Other_sequence | Oden_isotig26129 | ||||||||
| JO470208.1 | |||||||||
| CRC10854_1 | |||||||||
| CBC00521_1 | |||||||||
| Dviv_isotig23481 | |||||||||
| JI169210.1 | |||||||||
| Associated_feature | WBsf987193 | ||||||||
| WBsf987194 | |||||||||
| WBsf987195 | |||||||||
| WBsf987196 | |||||||||
| WBsf987197 | |||||||||
| WBsf1011866 | |||||||||
| WBsf1011867 | |||||||||
| WBsf1011868 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00012779 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00043813 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017576 | ||||||||
| Expr1037387 | |||||||||
| Expr1147788 | |||||||||
| Expr2018065 | |||||||||
| Expr2036202 | |||||||||
| Drives_construct | WBCnstr00027504 | ||||||||
| Construct_product | WBCnstr00027504 | ||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (145) | |||||||||
| Interaction | WBInteraction000114189 | ||||||||
| WBInteraction000114200 | |||||||||
| WBInteraction000114202 | |||||||||
| WBInteraction000114203 | |||||||||
| WBInteraction000123701 | |||||||||
| WBInteraction000214741 | |||||||||
| WBInteraction000447271 | |||||||||
| WBInteraction000448176 | |||||||||
| WBInteraction000453756 | |||||||||
| Map_info | Map | II | Position | -7.0337 | Error | 0.033445 | |||
| Positive | Positive_clone | F02E11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027644 | ||||||||
| WBPaper00031484 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
