WormBase Tree Display for Gene: WBGene00009142

WBGene00009142 SMap: S_parent: Sequence: F26A3
  Identity: Version: 1
    Name: Sequence_name: F26A3.4
      Molecular_name: F26A3.4
        F26A3.4.1
        CE09669
      Other_name: CELE_F26A3.4 Accession_evidence: NDB BX284601
      Public_name: F26A3.4
    DB_info: Database: AceView gene 1I234
        WormQTL gene WBGene00009142
        WormFlux gene WBGene00009142
        NDB locus_tag CELE_F26A3.4
        Panther gene CAEEL|WormBase=WBGene00009142|UniProtKB=Q93592
          family PTHR45961
        NCBI gene 172525
        RefSeq protein NM_059732.5
        TREEFAM TREEFAM_ID TF316009
        TrEMBL UniProtAcc Q93592
        UniProt_GCRP UniProtAcc Q93592
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (15)
    RNASeq_FPKM (74)
    GO_annotation: 00086265
      00086266
      00086267
      00086268
      00116924
      00116925
      00116926
    Ortholog (48)
    Paralog: WBGene00007302 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00017428 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00014074 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00003043 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00006923 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00007697 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00009207 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00015807 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00021867 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable protein tyrosine/serine/threonine phosphatase activity. Predicted to be involved in dephosphorylation. Located in striated muscle dense body. Expressed in neurons. Is an ortholog of human DUSP28 (dual specificity phosphatase 28). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F26A3.4
    Corresponding_transcript: F26A3.4.1
    Other_sequence (80)
    Associated_feature: WBsf984239
      WBsf984240
      WBsf984241
      WBsf984242
      WBsf984243
      WBsf1010118
      WBsf1010119
      WBsf1010120
      WBsf219797
  Experimental_info: RNAi_result: WBRNAi00109690 Inferred_automatically: RNAi_primary
      WBRNAi00109643 Inferred_automatically: RNAi_primary
      WBRNAi00045590 Inferred_automatically: RNAi_primary
      WBRNAi00066166 Inferred_automatically: RNAi_primary
      WBRNAi00109737 Inferred_automatically: RNAi_primary
      WBRNAi00033612 Inferred_automatically: RNAi_primary
      WBRNAi00075929 Inferred_automatically: RNAi_primary
      WBRNAi00109784 Inferred_automatically: RNAi_primary
      WBRNAi00003472 Inferred_automatically: RNAi_primary
      WBRNAi00094939 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr4582
      Expr9386
      Expr1027524
      Expr1149501
      Expr2002997
      Expr2021213
    Drives_construct: WBCnstr00012091
      WBCnstr00032430
    Construct_product: WBCnstr00013951
      WBCnstr00032430
    Microarray_results (20)
    Expression_cluster: WBPaper00032528:L3_enriched
      WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00033065:isp-1-1(qm150)_upregulated
      WBPaper00034761:hlh-30_downregulated
      WBPaper00037055:DAF-16_binding_DNA
      WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:coelomocytes_embryo_enriched
      WBPaper00037950:coelomocytes_embryo_SelectivelyEnriched
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00040221:DAF-12_target_ALF4
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044578:reduced-humidity_downregulated_microarray
      WBPaper00044736:flat_dev_expression
      WBPaper00045257:bar-1(ga80)_upregulated
      WBPaper00045521:Spermatogenic
      WBPaper00045571:germline-ablation_upregulated
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
      WBPaper00046509:htz-1(ok3099)_downregulated
      WBPaper00046741:Garlic-Extract_downregulated_mRNA
      WBPaper00048923:Aging_regulated
      WBPaper00048952:glucose_repressed
      WBPaper00048988:daf-16(mu86)_downregulated_neuron
      WBPaper00048988:neuron_expressed
      WBPaper00049098:hrde-1(tm1200)-induced_23C
      WBPaper00049954:BPS_downregulated
      WBPaper00050053:muscle_enriched_Day4
      WBPaper00050094:mes-2(bn11)_upregulated
      WBPaper00050094:mes-6(bn66)_upregulated
      WBPaper00050344:PLM-neuron_enriched
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_adult_20C
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00050990:seam_expressed
      WBPaper00051039:intestine_enriched
      WBPaper00051305:vit-2(ac3)_downregulated
      WBPaper00051352:Long-Term-Association-Memory_downregulated
      WBPaper00051404:alg-1(gk214)_downregulated
      WBPaper00052884:emb-4(hc60)_upregulated
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053295:lin-22(icb38)_downregulated
      WBPaper00053295:lin-22(ot267)_downregulated
      WBPaper00053295:lin-22(ot269)_downregulated
      WBPaper00053302:zidovudine_24h_regulated
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_fed-L1_Truseq
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_starved-L1_Truseq
      WBPaper00053368:F.oxysporum_regulated
      WBPaper00053388:dauer_regulated_Cluster4
      WBPaper00053713:Starvation-induced_postdauer_vs_control_upregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00055049:S.gordonii_upregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Psora-Allantoin_downregulated
      WBPaper00055354:Psora_downregulated
      WBPaper00055354:Rapamycin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Metformin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin_downregulated
      WBPaper00055354:Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rifampicin-Psora_downregulated
      WBPaper00055354:Rifampicin_downregulated
      WBPaper00055482:pmt-2(RNAi)_upregulated
      WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
      WBPaper00056039:efa-6(tm3124)_upregulated
      WBPaper00056139:soil-microbiota_downregulated
      WBPaper00056443:DietaryRestriction_downregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056471:S.aureus-4h_upregulated_N2
      WBPaper00056809:smn-1(ok355)_downregulated
      WBPaper00056826:hmc_biased
      WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
      WBPaper00057006:DietaryRestriction_upregulated
      WBPaper00057068:Cadmium_upregulated
      WBPaper00057140:pptr-1(tm3103)_downregulated
      WBPaper00057161:meg-3(tm4259)_meg-4(ax2026)_upregulated_endo-siRNA_targets
      WBPaper00057162:meg-3_meg-4_upregulated_sRNA
      WBPaper00057288:Cold_downregulated_transcript
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00058711:paraquat_downregulated
      WBPaper00058711:wdr-5(ok1417)_downregulated
      WBPaper00058948:PA14_downregulated
      WBPaper00059253:sucrose_downregulated
      WBPaper00059253:sucrose_stearic-acid_downregulated
      WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
      WBPaper00059356:BAZ-2_SET-6_interacting
      WBPaper00059471:EGL-43_interacting
      WBPaper00059566:wdr-23(mac32)_upregulated
      WBPaper00059598:HeatShock_upregulated
      WBPaper00059987:Wounding_upregulated
      WBPaper00060100:SiNP_downregulated_mRNA
      WBPaper00060358:B.thuringiensis_non-pathogen_regulated_N2
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060683:hlh-11(overexpression)_downregulated
      WBPaper00060703:nas-38(ok3407)_upregulated
      WBPaper00060871:M.humicola-infection_12h_regulated
      WBPaper00060871:M.humicola-infection_48h_regulated
      WBPaper00061274:microgravity_downregulated
      WBPaper00061409:neuronal-fzo-1(RNAi)_upregulated
      WBPaper00061527:F54D5.3_7003-F54D5.3_7004
      WBPaper00061651:I5_enriched
      WBPaper00061651:M1_enriched
      WBPaper00061753:csr-1(tor159)_downregulated_20C
      WBPaper00061753:csr-1(tor159)_upregulated_25C
      WBPaper00061800:miR-85(n4117)_upregulated_20C
      WBPaper00061902:camt-1(ok515)_regulated_BAG
      WBPaper00062056:lin-36(we31)_downregulated
      WBPaper00062078:NMR-HspB1_regulated
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062193:daf-16(RNAi)_downregulated
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00062354:H.zoospora_6h_regulated
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064156:lbp-3(overexpress)_upregulated
      WBPaper00064532:pals-25(jy111)_downregulated
      WBPaper00064716:paraquat_downregulated
      WBPaper00064727:daf-2(e1370)_upregulated
      WBPaper00064788:ketamine_downregulated
      WBPaper00064999:miR-229-64-65-66_downregulated
      WBPaper00065120:body-muscle-transcriptome
      WBPaper00065975:P-body_vs_WholeAnimal_depleted
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066062:xrep-4(lax137)_upregulated
      cgc4386_cluster_2_2
      cgc4489_group_9
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00029437:dcr-1_upregulated
      WBPaper00030985:Enterococcus_faecalis_upregulated
      WBPaper00030985:Photorhabdus_luminescens_downregulated
      WBPaper00031003:0hr_muscle_enriched
      WBPaper00031003:hlh_1_enriched
      WBPaper00031003:total_muscle_enriched
      WBPaper00031252:AIN-1_IP_enriched
      WBPaper00031252:AIN-2_IP_enriched
      WBPaper00032948:StarveUp2
      WBPaper00033101:spr-5_regulated
      WBPaper00034661:AgNPs_upregulated
      WBPaper00034739:N2moreDR1350
      WBPaper00035479:daf-16(RNAi)_downregulated
      WBPaper00035560:ahr-1_downregulated
      WBPaper00036123:Atrazine_regulated
      WBPaper00036286:Pattern_D
      WBPaper00036383:ash-2_Day8_regulated
      WBPaper00038231:Cry5B_1.5-fold_upregulated
      WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
      WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.5
      WBPaper00040876:mir-35_downregulated
      WBPaper00040963:Q100_down
      WBPaper00040963:Q200_down
      WBPaper00040985:AIN-2_asynchronous_intestine
      WBPaper00040985:AIN-2_asynchronous_muscle
      WBPaper00040985:AIN-2_L4_intestine
      WBPaper00041002:HF_3d_0.2mM_Up
      WBPaper00041002:HF_3d_2.0mM_Up
      WBPaper00041002:HQ_3d_2.0mM_Up
      WBPaper00041606:CE_B.thuringiensis-DB27_regulated
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00042178:hlh-29(tm284)_upregulated
      WBPaper00042274:tbx-2(bx59)_upregulated
      WBPaper00042548:miRISC_enriched
      WBPaper00044013:nasp-1_downregulated
      WBPaper00045263:isp-1(qm150)_upregulated
      WBPaper00045263:nuo-6(qm200)_upregulated
      WBPaper00045865:biofilm_upregulated_A
      WBPaper00050650:mBmkTX_upregulated
      WBPaper00051448:P.aeruginosa_Liquid-Killing_upregulated
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      WBPaper00053827:pyoverdine_upregulated
      WBPaper00055899:nitroguanidine_regulated
      WBPaper00057098:SiO2-nanoparticles_downregulated
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_SM
      [cgc6390]:male_soma-enriched
    Interaction (179)
  Map_info (2)
  Reference: WBPaper00029254
    WBPaper00031039
    WBPaper00038444
    WBPaper00038491
    WBPaper00055090
    WBPaper00064934
  Method: Gene