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WormBase Tree Display for Gene: WBGene00017651

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Name Class

WBGene00017651SMapS_parentSequenceF21A9
IdentityVersion1
NameSequence_nameF21A9.2
Molecular_nameF21A9.2
F21A9.2.1
CE44749
Other_nameF21A9.aCurator_confirmedWBPerson1983
RemarkOld cosmid naming mapped via unique overlapping PCR_product on CDSs
CELE_F21A9.2Accession_evidenceNDBBX284601
Public_nameF21A9.2
DB_infoDatabase (10)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:59WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (54)
StrainWBStrain00031621
RNASeq_FPKM (74)
Ortholog (22)
Structured_descriptionAutomated_descriptionPredicted to enable RNA polymerase II-specific DNA-binding transcription factor binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF21A9.2
Corresponding_CDS_historyF21A9.2:wp156
F21A9.2:wp213
Corresponding_transcriptF21A9.2.1
Associated_featureWBsf649041
WBsf983204
WBsf983205
WBsf1009540
WBsf219169
Transcription_factorWBTranscriptionFactor000990
Experimental_infoRNAi_resultWBRNAi00045168Inferred_automaticallyRNAi_primary
WBRNAi00031202Inferred_automaticallyRNAi_primary
Expr_patternExpr1028702
Expr1037577
Expr1149106
Expr2002807
Expr2021024
Drives_constructWBCnstr00027130
Construct_productWBCnstr00027130
Microarray_results (19)
Expression_clusterWBPaper00033065:isp-1-1(qm150)_downregulated
WBPaper00037950:A-class-motor-neurons_CoreEnriched
WBPaper00037950:A-class-motor-neurons_embryo_enriched
WBPaper00037950:A-class-motor-neurons_embryo_SelectivelyEnriched
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:A-class-motor-neurons_larva_enriched
WBPaper00037950:A-class-motor-neurons_larva_SelectivelyEnriched
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00040560:hpl-2_L3_upregulated
WBPaper00041370:spg-7(RNAi)_upregulated_atfs-1_dependent
WBPaper00044037:eat-2_upregulated
WBPaper00044736:flat_dev_expression
WBPaper00045521:Spermatogenic
WBPaper00045618:fbf-1_upregulated
WBPaper00045861:set-2(ok952)_upregulated
WBPaper00045861:wdr-5(ok1417)_upregulated
WBPaper00046121:endoderm_unique
WBPaper00046338:intestine_unique
WBPaper00048971:daf-16(mgDf50)_upregulated_L1
WBPaper00048988:neuron_expressed
WBPaper00049377:MWCNT_upregulated
WBPaper00049954:BPS_upregulated
WBPaper00050094:mes-2(bn11)_upregulated
WBPaper00050094:mes-6(bn66)_upregulated
WBPaper00050193:met-2(n4256)set-25(n5021)_upregulated_L1
WBPaper00050344:AFD-neuron_enriched
WBPaper00050468:hlh-30-dependent_Cry5B_regulated
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050990:intestine_enriched
WBPaper00050990:intestine_expressed
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053321:PGCs_depleted_NuGen
WBPaper00053599:oocyte_vs_mitosis_upregulated
WBPaper00053606:elt-2(ca15)_vs_elt-2(ca15);elt-7(tm840)_doenregulated
WBPaper00053606:N2_vs_elt-2(ca15)_upregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:isp-1(qm150)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00055648:sperm_expressed
WBPaper00055941:atfs-1(et15)_upregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056161:male_enriched_siRNA
WBPaper00056284:ints-5(RNAi)_upregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056809:smn-1(ok355)_upregulated
WBPaper00056826:SGP_biased
WBPaper00056855:his-72(uge40)_upregulated
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058691:cfp-1(tm6369)_downregulated
WBPaper00058948:PA14_downregulated
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00061203:let-418(n3536)_upregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:AVG
WBPaper00061340:DA
WBPaper00061340:DA_DB
WBPaper00061340:DB
WBPaper00061340:DD
WBPaper00061340:hyp4_hyp5_hyp6
WBPaper00061341:28C_24h_upregulated
WBPaper00061341:28C_48h_upregulated
WBPaper00061479:hda-1(ne4748)_upregulated
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061479:mep-1(ne4629)_upregulated
WBPaper00061479:ubc-9(ne4833)_upregulated
WBPaper00061527:ldb-1_2877-scd-1_3086
WBPaper00061651:SAB_enriched
WBPaper00062156:jmjd-5(zr1234)_upregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062345:bortezomib_4h_upregulated_zip-1(jy13)
WBPaper00062590:Aging_downregulated_neuron
WBPaper00062672:let-418(n3536)dcp-66(RNAi)_upregulated
WBPaper00062672:let-418(n3536)_upregulated
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064158:xpo-1(RNAi)_upregulated
WBPaper00064502:nhr-23(kry61)_upregulated
WBPaper00064632:daf-2(e1370)_upregulated_intestine
WBPaper00064637:cox-5B(RNAi)_upregulated
WBPaper00064721:fasn-1(g14)_downregulated_starved
WBPaper00064871:hypoxia_downregulated_F1
WBPaper00064933:bcf-1(ylf1)_downregulated_transcript
WBPaper00065029:cadmium_upregulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065841:14_0
WBPaper00065841:14_1
WBPaper00065841:14_2
WBPaper00065841:132_0
WBPaper00066110:tetraploid_vs_diploid_upregulated
cgc4489_group_19
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Enriched_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00030839:Embryo_A_Class
WBPaper00031003:24hr_muscle_depleted
WBPaper00031003:hlh_1_enriched
WBPaper00031003:total_muscle_depleted
WBPaper00031252:AIN-2_IP_enriched
WBPaper00034757:up_by_oxidative_stress
WBPaper00035084:embryo_enriched_AIN-2_IP
WBPaper00035084:L1_enriched_AIN-2_IP
WBPaper00035084:L3_enriched_AIN-2_IP
WBPaper00035227:heat_shock_regulated
WBPaper00036123:Cadmium_regulated
WBPaper00036123:Fluoranthene_regulated
WBPaper00036286:Pattern_F
WBPaper00037695:LD_3-day
WBPaper00037695:WC_5-day
WBPaper00041174:environmental
WBPaper00041174:genotypic
WBPaper00041174:genotypic_and_environmental
WBPaper00041370:spg-7(RNAi)_upregulated
WBPaper00041609:hpl-1_hpl-2_upregulated
WBPaper00042548:miRISC_enriched
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00045960:L1-L4-lethargus_upregulated
WBPaper00045960:L4-lethargus_upregulated
WBPaper00047070:N2_starvation_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00053236:daf-16(mgDF50)_regulated_Starved
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00055899:nitroguanidine_regulated
[cgc5767]:expression_class_E
[cgc5767]:expression_class_E_pi(143_min)
[cgc5767]:expression_class_SE
[cgc5767]:expression_class_SE_pi(143_min)
[cgc6390]:mixed_spermatogenesis-somatic
InteractionWBInteraction000166576
WBInteraction000221278
WBInteraction000242999
WBInteraction000304556
WBInteraction000420076
WBInteraction000525825
WBInteraction000525826
WBInteraction000525949
WBInteraction000525950
WBInteraction000525951
WBInteraction000525952
WBInteraction000525953
WBInteraction000525954
WBInteraction000525955
WBInteraction000525956
WBInteraction000525957
WBInteraction000525958
WBInteraction000525959
WBInteraction000525960
WBInteraction000525961
WBInteraction000525962
WBInteraction000525963
WBInteraction000525964
WBInteraction000525965
WBInteraction000525966
WBInteraction000525967
WBInteraction000525968
WBInteraction000525969
WBInteraction000525970
WBInteraction000526078
WBInteraction000526143
WBInteraction000526240
WBInteraction000526314
WBInteraction000526501
WBInteraction000526574
WBInteraction000526779
WBInteraction000527261
WBInteraction000527539
WBInteraction000527780
Map_infoPositivePositive_cloneF21A9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionI-2.85655
MethodGene