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WormBase Tree Display for Gene: WBGene00009259

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Name Class

WBGene00009259SMapS_parentSequenceF29G6
IdentityVersion2
NameCGC_namehpo-34Paper_evidenceWBPaper00038231
Person_evidenceWBPerson26
Sequence_nameF29G6.3
Molecular_name (18)
Other_nameCELE_F29G6.3Accession_evidenceNDBBX284606
Public_namehpo-34
DB_infoDatabaseAceViewgeneXM130
WormQTLgeneWBGene00009259
WormFluxgeneWBGene00009259
NDBlocus_tagCELE_F29G6.3
NCBIgene181340
RefSeqproteinNM_077521.6
NR_072137.1
NM_001381107.1
NM_001392846.1
NM_077522.7
NM_001029443.6
TREEFAMTREEFAM_IDTF350348
TrEMBLUniProtAccQ6A2D2
Q93637
Q93636
K8FDY0
E3W743
UniProt_GCRPUniProtAccK8FDY0
RNAcentralURSidURS000034D6FE
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:50WBPerson1971EventImportedInitial conversion from CDS class of WS125
226 Apr 2011 13:31:47WBPerson2970Name_changeCGC_namehpo-34
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhpo
Allele (127)
StrainWBStrain00032851
RNASeq_FPKM (74)
GO_annotation00086315
00086316
00086317
Ortholog (23)
Structured_descriptionAutomated_descriptionPredicted to enable kinase activity. Predicted to be involved in phosphorylation.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF29G6.3a
F29G6.3b
F29G6.3c
F29G6.3d
F29G6.3f
Corresponding_CDS_historyF29G6.3a:wp121
Corresponding_transcriptF29G6.3e
F29G6.3a.1
F29G6.3b.1
F29G6.3c.1
F29G6.3d.1
F29G6.3f.1
F29G6.3f.2
F29G6.3f.3
Other_sequenceCR04846
CBC05176_1
CRC08883_1
HBC04486_1
CJC08955_1
ES414217.1
ES740491.1
Associated_feature (12)
Experimental_infoRNAi_result (15)
Expr_patternExpr1026055
Expr1034038
Expr1149838
Expr2012574
Expr2030810
Drives_constructWBCnstr00032335
Construct_productWBCnstr00032335
Microarray_results (50)
Expression_clusterWBPaper00031040:TGF-beta_adult_upregulated
WBPaper00032031:DConiospora_downregulated_cDNA_24h
WBPaper00032528:L3_enriched
WBPaper00032976:dosage_compensated_genes
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00033070:Elbe_upregulated
WBPaper00033070:Rhine_upregulated
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037047:aging_accelerated_insoluble_protein
WBPaper00037047:insoluble_protein
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:intestine_embryo_enriched
WBPaper00037950:intestine_embryo_SelectivelyEnriched
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_embryo_enriched
WBPaper00037950:pharyngeal-muscle_embryo_SelectivelyEnriched
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038118:aak-2(gt33)_upregulated
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
WBPaper00040221:DAF-12_target_ALF4
WBPaper00040990:PA14_upregulated
WBPaper00044501:gld-1_let-7_regulated
WBPaper00044557:DietaryRestriction_downregulated
WBPaper00044656:tatn-1(qd182)_upregulated
WBPaper00044736:flat_dev_expression
WBPaper00045316:prg-1_upregulated_L1
WBPaper00045390:ubc-9(RNAi)_upregulated
WBPaper00045417:128Q-huntingtin_downreglated
WBPaper00045521:Gender_Neutral
WBPaper00045934:wrn-1(gk99)_upregulated
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00048988:neuron_expressed
WBPaper00049368:daf-2(e1370)_downregulated
WBPaper00049498:npr-1(ur89)_regulated_3
WBPaper00049545:cco-1(RNAi)_upregulated
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049732:blmp-1(tm548);daf-7(e1372ts)_vs_daf-7(e1372ts)_upregulated
WBPaper00049736:daf-2(e1370)_downregulated_15deg-then-25deg(12hr)
WBPaper00049905:Age_variant_expression
WBPaper00049920:hyl-2(tm2031)_upregulated
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050163:chd-3(eh4);let-418(RNAi)_downregulated_24-cell-embryo
WBPaper00050163:chd-3(eh4);let-418(RNAi)_downregulated_100-cell-embryo
WBPaper00050163:chd-3(eh4)_downregulated_24-cell-embryo
WBPaper00050163:chd-3(eh4)_downregulated_100-cell-embryo
WBPaper00050332:skn-1(RNAi)_downregulated
WBPaper00050412:cco-1(RNAi)_upregulated_N2
WBPaper00050448:KGB-1-induced
WBPaper00050468:hlh-30-dependent_Cry5B_regulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050859:upregulated_glh-1(gk100)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:body-muscle_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:pharynx_expressed
WBPaper00050990:seam_expressed
WBPaper00051039:intestine_enriched
WBPaper00051245:cytoplasm_specific
WBPaper00051245:intestine_cytoplasm_expressed
WBPaper00051245:intestine_specific
WBPaper00051311:VGLN-1-interacting
WBPaper00051352:Long-Term-Association-Memory_downregulated
WBPaper00051461:pig-1(gm344)_downregulated
WBPaper00051558:aging_regulated
WBPaper00053094:adr-2(ok735)_neuron_downregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053599:female_vs_male_downregulated
WBPaper00053606:elt-2(ca15)_vs_elt-2(ca15);elt-7(tm840)_doenregulated
WBPaper00053606:N2_vs_elt-2(ca15)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00055060:flr-1(RNAi)_upregulated
WBPaper00055334:DLC-1_interacting
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055386:eat-2(ad465)_upregulated
WBPaper00055827:daf-2(e1370)_downregulated
WBPaper00055971:nhl-2(ok818)_20C_downregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056139:soil-microbiota_downregulated
WBPaper00056139:soil-microbiota_upregulated
WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
WBPaper00056284:ints-2(RNAi)_downregulated
WBPaper00056326:zip-3(gk3164)_upregulated_P.aeruginosa-infected
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056809:smn-1(ok355)_downregulated
WBPaper00056826:hmc_biased
WBPaper00056855:his-72(uge40)_downregulated
WBPaper00056868:P.aeruginosa_upregulated_smallRNA
WBPaper00056900:PID-3_interacting
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057140:pptr-1(tm3103)_upregulated
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058691:cfp-1(tm6369)_upregulated
WBPaper00058691:set-2(bn129)_upregulated
WBPaper00058725:sftb-1(cer6)_downregulated
WBPaper00058948:PA14_downregulated
WBPaper00058969:RIS_depleted
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059566:wdr-23(mac32)_upregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059895:wounding_downregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060683:hlh-11(overexpression)_downregulated
WBPaper00060871:M.humicola-infection_12h_regulated
WBPaper00060908:TEBP-1_interacting
WBPaper00060908:TEBP-2_interacting
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00060911:prx-5(RNAi)_upregulated_mRNA
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:I5
WBPaper00061340:PVP
WBPaper00061341:28C_48h_downregulated
WBPaper00061377:MYRF-2_interacting
WBPaper00061377:PAN-1_interacting
WBPaper00061479:ubc-9(ne4833)_upregulated
WBPaper00061527:C18B2.5-haf-4_181
WBPaper00061527:hpo-6-C49C3.9
WBPaper00061651:Intestine_enriched
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062554:MAGU-2_interacting
WBPaper00062590:Aging_upregulated_hypodermis
WBPaper00062669:extracellular-vesicle_protein
WBPaper00064005:starvation_upregulated_N2_mRNA
WBPaper00064005:starvation_upregulated_N2_protein
WBPaper00064055:trl-1(cas1077)_upregulated_starved
WBPaper00064071:NHR-49_interacting
WBPaper00064163:ZNFX-1_interacting_young-adult
WBPaper00064716:paraquat_downregulated
WBPaper00064871:hypoxia_upregulated_F1
WBPaper00065086:JU1400_N.ausubeli_regulated
WBPaper00065086:JU1400_N.ferruginous_regulated
WBPaper00065086:N2_N.ausubeli_regulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065120:body-muscle-transcriptome
WBPaper00065158:25C_vs_15C_downregulated_WholeAnimal
WBPaper00065373:sek-1(km4)_downregulated_cisplatin
WBPaper00065373:sek-1(km4)_downregulated_Ref
WBPaper00065835:Day11_vs_Day1_downregulated
WBPaper00065841:3_1
WBPaper00065841:3_2
WBPaper00065841:3_4
WBPaper00065841:3_5
WBPaper00065841:21_1
WBPaper00065841:30_3
WBPaper00065841:61_0
WBPaper00065841:94_0
WBPaper00065975:P-body_vs_oocyte_depleted
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065993:glp-1(e2141)_upregulated
cgc4386_cluster_1_2
cgc4489_group_3
WBPaper00005124:progesterone_10-7M_regulated
WBPaper00024393:strongly_regulated_dauer_genes
WBPaper00024671:AFD_AWB_vs_unsorted_downregulated
WBPaper00025141:N2_Expressed_Genes
WBPaper00026980:intestine_enriched
WBPaper00028474:dys-1_upregulated
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:hlh_1_enriched
WBPaper00031003:total_muscle_depleted
WBPaper00031252:AIN-1_IP_enriched
WBPaper00031252:AIN-2_IP_enriched
WBPaper00031532:Larva_Pan_Neuronal_Depleted
WBPaper00031832:slr-2_regulated
WBPaper00034661:AgNPs_downregulated
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00037695:WC_5-day
WBPaper00038231:Cry5B_1.5-fold_downregulated
WBPaper00038427:lin-54_embryo_changed
WBPaper00039851:Live_C_albicans_vs_HK_OP50
WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
WBPaper00040210:Diazinon_24C_regulated
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_developing
WBPaper00040858:eQTL_regulated_juvenile
WBPaper00040876:mir-35_downregulated
WBPaper00040963:TA200_up
WBPaper00040963:TA300_up
WBPaper00040985:AIN-2_asynchronous_intestine
WBPaper00041002:HF_3d_0.2mM_Up
WBPaper00041002:HF_3d_2.0mM_Up
WBPaper00041002:HF_11d_0.2mM_Up
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041906:I-3690_vs_OP50_3d
WBPaper00041939:control_vs_EtBr-exposed_24h
WBPaper00041939:control_vs_UVC-EtBr-exposed_3h
WBPaper00041939:control_vs_UVC-EtBr-exposed_24h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_24h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_24h
WBPaper00042128:gei-8(ok1671)_downregulated
WBPaper00042178:hlh-29(tm284)_upregulated
WBPaper00045263:0.1mM-paraquat_downregulated
WBPaper00045673:colistin_upregulated
WBPaper00048624:hlh-25(ok1710)_upregulated
WBPaper00048637:lin-35(n745)_starvation_downregulated
WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
WBPaper00048989:N2_rapamycin_upregulated
WBPaper00057098:SiO2-nanoparticles_downregulated
[cgc6390]:Cluster_C
InteractionWBInteraction000029799
WBInteraction000031002
WBInteraction000031531
WBInteraction000031579
WBInteraction000032106
WBInteraction000162060
WBInteraction000165444
WBInteraction000177910
WBInteraction000178906
WBInteraction000180217
WBInteraction000183369
WBInteraction000199811
WBInteraction000200351
WBInteraction000207971
WBInteraction000218190
WBInteraction000223438
WBInteraction000224498
WBInteraction000233756
WBInteraction000262512
WBInteraction000266899
WBInteraction000267441
WBInteraction000268241
WBInteraction000318703
WBInteraction000322835
WBInteraction000325613
WBInteraction000326872
WBInteraction000329674
WBInteraction000334697
WBInteraction000350630
WBInteraction000359346
WBInteraction000361924
WBInteraction000366727
WBInteraction000384301
WBInteraction000384470
WBInteraction000384471
WBInteraction000384472
WBInteraction000384473
WBInteraction000388659
WBInteraction000389779
WBInteraction000411970
WBInteraction000416513
WBInteraction000429266
WBInteraction000433859
WBInteraction000440066
WBInteraction000446907
WBInteraction000447880
WBInteraction000456799
WBInteraction000462453
WBInteraction000507593
WBInteraction000507594
WBInteraction000507595
WBInteraction000507597
WBInteraction000507599
WBInteraction000507600
WBInteraction000507602
WBInteraction000507603
WBInteraction000507609
WBInteraction000507611
WBInteraction000507612
WBInteraction000507613
WBInteraction000507614
WBInteraction000507615
WBInteraction000507616
WBInteraction000507618
WBInteraction000507619
WBInteraction000507621
WBInteraction000507623
WBInteraction000507624
WBInteraction000507625
WBInteraction000507626
WBInteraction000507627
WBInteraction000508569
WBInteraction000508570
WBInteraction000508602
WBInteraction000509812
WBInteraction000509813
WBInteraction000509814
WBInteraction000509818
WBInteraction000509819
WBInteraction000509820
WBInteraction000509843
WBInteraction000509844
WBInteraction000509848
WBInteraction000509849
WBInteraction000509851
WBInteraction000509852
WBInteraction000509856
WBInteraction000509857
WBInteraction000509859
WBInteraction000509864
WBInteraction000509867
WBInteraction000509869
WBInteraction000509870
WBInteraction000509871
WBInteraction000509874
WBInteraction000509875
WBInteraction000509878
WBInteraction000509880
WBInteraction000513023
WBInteraction000513030
WBInteraction000513037
WBInteraction000513045
WBInteraction000513058
WBInteraction000513265
WBInteraction000514252
WBInteraction000514255
WBInteraction000514258
WBInteraction000514260
WBInteraction000514263
WBInteraction000514270
WBInteraction000514272
WBInteraction000514273
WBInteraction000514274
WBInteraction000514278
WBInteraction000514285
WBInteraction000514289
WBInteraction000514293
WBInteraction000514295
WBInteraction000514296
WBInteraction000514298
WBInteraction000514303
WBInteraction000514313
WBInteraction000514315
WBInteraction000514324
WBInteraction000514328
WBInteraction000514330
WBInteraction000514339
WBInteraction000514340
WBInteraction000514346
WBInteraction000514348
WBInteraction000514357
WBInteraction000514359
WBInteraction000514363
WBInteraction000514372
WBInteraction000514374
WBInteraction000514375
WBInteraction000514378
WBInteraction000514379
WBInteraction000514380
WBInteraction000514381
WBInteraction000514383
WBInteraction000514388
WBInteraction000514396
WBInteraction000514397
WBInteraction000514399
WBInteraction000514400
WBInteraction000515475
WBInteraction000515497
WBInteraction000515499
WBInteraction000519802
WBInteraction000521496
WBInteraction000521501
WBInteraction000523655
WBInteraction000543683
WBInteraction000543793
WBInteraction000543806
WBInteraction000544051
WBInteraction000544416
WBInteraction000545885
WBInteraction000545920
WBInteraction000545956
WBInteraction000546067
WBInteraction000546148
WBInteraction000546216
WBInteraction000546275
WBInteraction000546418
WBInteraction000546489
WBInteraction000546537
WBInteraction000546659
WBInteraction000546739
WBInteraction000546840
WBInteraction000546910
WBInteraction000546946
WBInteraction000547944
WBInteraction000547945
WBInteraction000547946
WBInteraction000547947
WBInteraction000550861
WBInteraction000552431
WBInteraction000552656
WBInteraction000561975
WBInteraction000563938
WBInteraction000564595
WBInteraction000565503
WBInteraction000566216
WBInteraction000566495
WBInteraction000572471
WBInteraction000572721
WBInteraction000576387
WBInteraction000580640
WBInteraction000583863
WBInteraction000584206
WBInteraction000586539
Map_infoMapXPosition4.20843
PositivePositive_cloneF29G6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00061547
WBPaper00064064
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene