WormBase Tree Display for Gene: WBGene00026596

WBGene00026596 SMap: S_parent: Sequence: cb25.fpc0071c2
  Identity: Version: 2
    Name: CGC_name: Cbr-ocrl-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBG03815
      Molecular_name: CBG03815
        CBG03815.1
        CBP36950
      Other_name: CBG_03815 Accession_evidence: NDB HE600906
      Public_name: Cbr-ocrl-1
    DB_info: Database: NDB locus_tag CBG_03815
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:56 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 15 Oct 2007 15:19:45 WBPerson2970 Name_change: CGC_name: Cbr-ocrl-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ocrl
    Allele: WBVar00108769
      WBVar00017684
      WBVar00108770
      WBVar00017674
      WBVar00108767
      WBVar00108768
      WBVar00017679
    RNASeq_FPKM: WBls:0000002 19.3197 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        23.2644 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        24.4806 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        30.8576 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        25.595 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        26.1014 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        28.9383 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 17.5012 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        19.3096 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        21.118 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        20.28 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        22.2207 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 21.9377 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        23.0205 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        24.1033 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        20.668 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        22.8529 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        23.2748 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        26.8121 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 0.823537 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        24.4743 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        2.82333 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        9.37372 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        10.4549 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        13.6986 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        8.26097 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
      WBls:0000035 12.9082 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 10.7088 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        12.7481 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        13.97 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        14.7874 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        1.52404 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        28.8598 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 24.5402 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        37.4324 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        39.7695 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        41.119 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        42.4685 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        42.9516 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        33.3453 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        37.5281 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        40.9316 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        42.0937 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 16.1388 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        17.9771 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        21.3798 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        21.7065 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        21.7998 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        31.7967 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        21.0987 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        21.2393 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        21.6829 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 20.2326 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        21.118 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        21.5388 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        21.5431 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
    GO_annotation: 00130128
      00130129
      00130130
      00130131
    Contained_in_operon: CBOPA0143
    Ortholog (33)
    Paralog: WBGene00024985 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00026820 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00036552 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00037204 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00038937 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00042594 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable phosphatase activity. Predicted to be involved in phosphatidylinositol dephosphorylation and signal transduction. Is an ortholog of C. elegans ocrl-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG03815
    Corresponding_CDS_history: CBG03815:bp194
    Corresponding_transcript: CBG03815.1
    Other_sequence (23)
  Experimental_info: Expr_pattern: Expr1068297
    Microarray_results: GPL8303_CB6_WBGene00026596_A
      GPL8303_CB6_WBGene00026596_B
      GPL8303_CB6_WBGene00026596_C
      GPL14143_CBG03815_834-893_0.823_78_B
      GPL14143_CBG03815_1025-1084_0.821_79_A
      GPL14143_CBG03815_2095-2154_0.958_1_C
  Method: Gene