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WormBase Tree Display for Gene: WBGene00038937

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Name Class

WBGene00038937SMapS_parentSequencecb25.fpc4140
IdentityVersion1
NameCGC_nameCbr-sac-2From_analysisInferred_from_orthology
Sequence_nameCBG19771
Molecular_nameCBG19771
CBG19771.1
CBP04639
Other_nameCBG_19771Accession_evidenceNDBHE601474
Public_nameCBG19771
DB_infoDatabaseNDBlocus_tagCBG_19771
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:08WBPerson1971EventImportedInitial conversion from brigace
228 May 2021 19:05:19WBPerson1983Name_changeCGC_nameCbr-sac-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsac
RNASeq_FPKMWBls:000000216.5487From_analysisRNASeq.briggsae.WBls:0000002.control_mean
18.8364From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
22.3934From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
8.41638From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
14.2476From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
15.9734From_analysisRNASeq.briggsae.WBls:0000002.control_mean
16.542From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000321.4101From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
23.2325From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
25.0548From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
20.0919From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
22.1856From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000412.7045From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
13.1784From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
13.6522From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
10.5633From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
13.2126From_analysisRNASeq.briggsae.WBls:0000004.control_mean
14.1879From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
14.9552From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000270.927704From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
10.6993From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.89075From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
4.83925From_analysisRNASeq.briggsae.WBls:0000027.control_mean
17.4531From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
6.79502From_analysisRNASeq.briggsae.WBls:0000027.control_median
7.99271From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003513.7524From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003811.1609From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
13.5766From_analysisRNASeq.briggsae.WBls:0000038.control_mean
15.6405From_analysisRNASeq.briggsae.WBls:0000038.control_median
20.1202From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
20.1764From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
2.84886From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
WBls:000004123.5349From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
27.1022From_analysisRNASeq.briggsae.WBls:0000041.control_mean
27.4495From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
27.7682From_analysisRNASeq.briggsae.WBls:0000041.control_median
28.0868From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
29.3376From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
21.5913From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
23.8873From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
25.6479From_analysisRNASeq.briggsae.WBls:0000041.control_mean
25.6684From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006314.1152From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
15.4946From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
15.9126From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
16.2309From_analysisRNASeq.briggsae.WBls:0000063.control_mean
16.4117From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
19.2202From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
16.1621From_analysisRNASeq.briggsae.WBls:0000063.control_median
16.514From_analysisRNASeq.briggsae.WBls:0000063.control_mean
17.93From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010115.1935From_analysisRNASeq.briggsae.total_over_all_stages.control_median
15.4648From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
15.3441From_analysisRNASeq.briggsae.total_over_all_stages.control_median
15.8786From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00142451
Ortholog (33)
ParalogWBGene00024985Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00026596Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00026820Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00036552Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00037204Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00042594Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable phosphatase activity. Is an ortholog of C. elegans sac-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG19771
Corresponding_CDS_historyCBG19771:bp194
CBG19771:bp212
CBG19771:bp255
Corresponding_transcriptCBG19771.1
Other_sequence (17)
Experimental_infoExpr_patternExpr1061182
Microarray_resultsGPL8303_CB6_WBGene00038937_A
GPL8303_CB6_WBGene00038937_B
GPL14143_CBG19771_1797-1856_0.924_18_C
GPL14143_CBG19771_1877-1936_0.816_133_B
GPL14143_CBG19771_1969-2028_0.891_54_A
MethodGene