WormBase Tree Display for Gene: WBGene00026820

WBGene00026820 SMap: S_parent: Sequence: cb25.fpc0071c2
  Identity: Version: 2
    Name: CGC_name: Cbr-figo-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBG04077
      Molecular_name: CBG04077
        CBG04077.1
        CBP14975
      Other_name: CBG_04077 Accession_evidence: NDB HE600906
      Public_name: Cbr-figo-1
    DB_info: Database: NDB locus_tag CBG_04077
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:51:56 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 01 Oct 2019 10:47:49 WBPerson1983 Name_change: CGC_name: Cbr-figo-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: figo
    Allele: WBVar00108989
    RNASeq_FPKM: WBls:0000002 10.0208 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        13.3402 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        14.0494 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        15.9503 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        14.1229 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        14.9999 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        16.4712 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 22.6665 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        24.1824 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        25.6984 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        26.2512 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        30.3888 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 13.2978 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        13.3317 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        13.3657 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
        12.927 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        13.6507 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        13.9436 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        14.7195 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
      WBls:0000024 (12)
      WBls:0000027 0.308617 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        15.3291 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        2.04552 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        5.89441 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        3.68168 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        5.31785 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        5.75027 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 9.52285 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 15.1348 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        1.59031 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        7.90863 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        7.98194 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        8.05525 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        8.17225 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
      WBls:0000041 22.3029 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        24.0996 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        25.8573 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        27.6151 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        30.5781 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        6.91863 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        10.4351 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        12.467 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        18.2833 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        18.6856 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
      WBls:0000063 15.0513 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        7.3724 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        8.22191 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        8.95476 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        9.58569 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        9.83721 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        10.6406 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        9.27022 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        9.97111 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 10.6519 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        12.2296 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        11.4284 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        12.6834 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00130447
      00130448
      00130449
    Ortholog (30)
    Paralog: WBGene00024985 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00026596 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00036552 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00037204 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00038937 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00042594 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity. Predicted to be involved in phosphatidylinositol dephosphorylation. Is an ortholog of C. elegans figo-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG04077
    Corresponding_CDS_history: CBG04077:bp194
    Corresponding_transcript: CBG04077.1
    Other_sequence (13)
  Experimental_info: Expr_pattern: Expr1051769
    Microarray_results: GPL8303_CB6_WBGene00026820_A
      GPL14143_CBG04077_475-534_0.785_202_C
      GPL14143_CBG04077_947-1006_0.825_126_B
      GPL14143_CBG04077_2469-2528_0.940_4_A
  Method: Gene