WormBase Tree Display for Gene: WBGene00042594

WBGene00042594 SMap: S_parent: Sequence: cb25.NA_171
  Identity: Version: 2
    Name: CGC_name: Cbr-sac-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBG24498
      Molecular_name: CBG24498
        CBG24498.1
        CBP12918
      Other_name: CBG_24498 Accession_evidence: NDB HE601095
      Public_name: Cbr-sac-1
    DB_info: Database: NDB locus_tag CBG_24498
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:12 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 26 Feb 2009 14:36:54 WBPerson9133 Name_change: CGC_name: Cbr-sac-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sac
    RNASeq_FPKM: WBls:0000002 27.862 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        35.9033 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        37.8325 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        42.0153 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        37.0919 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        39.2451 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        40.6577 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 38.8969 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        45.5404 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        52.1838 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        46.0845 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        47.1729 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 37.3037 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBls:0000004.control_median
        41.0315 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        44.7593 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        35.628 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        37.279 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        39.3702 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        41.8808 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 12.7441 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        1.84624 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        32.2795 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        4.10647 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        12.9555 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        13.5898 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        8.84813 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
      WBls:0000035 20.4435 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 18.19 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        18.7754 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        19.3607 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        23.9342 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        50.7865 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        7.39967 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
      WBls:0000041 67.5093 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        67.5239 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        68.7067 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        69.8895 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        72.8776 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        86.5876 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        111.822 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
        78.2385 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        83.3999 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        97.0671 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
      WBls:0000063 33.4169 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        35.2429 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        38.9347 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        41.1702 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        42.3266 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        55.93 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        40.013 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        41.0913 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        41.1571 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 35.0824 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        35.2429 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        37.5681 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        39.0415 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00145619
    Ortholog (21)
    Paralog: WBGene00024985 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00026596 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00026820 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00036552 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00037204 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00038937 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable phosphatase activity. Expressed in spermatheca and tail. Is an ortholog of C. elegans sac-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG24498
    Corresponding_CDS_history: CBG24498:bp194
    Corresponding_transcript: CBG24498.1
    Other_sequence (36)
  Experimental_info: Expr_pattern: Expr11582
      Expr1065213
    Drives_construct: WBCnstr00019072
    Microarray_results: GPL8303_CB6_WBGene00042594_A
      GPL8303_CB6_WBGene00042594_B
      GPL8303_CB6_WBGene00042594_C
      GPL14143_CBG24498_852-911_0.880_26_C
      GPL14143_CBG24498_1158-1217_0.911_12_B
      GPL14143_CBG24498_1279-1338_0.915_8_A
  Method: Gene