WormBase Tree Display for Gene: WBGene00023408
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| WBGene00023408 | SMap | S_parent | Sequence | T09A5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cex-2 | Person_evidence | WBPerson51 | |||||
| Sequence_name | T09A5.1 | ||||||||
| Molecular_name | T09A5.1a | ||||||||
| T09A5.1a.1 | |||||||||
| CE41840 | |||||||||
| T09A5.1b | |||||||||
| CE41841 | |||||||||
| T09A5.1b.1 | |||||||||
| Other_name | CELE_T09A5.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | cex-2 | ||||||||
| DB_info | Database | AceView | gene | 2I120 | |||||
| WormQTL | gene | WBGene00023408 | |||||||
| WormFlux | gene | WBGene00023408 | |||||||
| NDB | locus_tag | CELE_T09A5.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00023408|UniProtKB=P45961 | |||||||
| family | PTHR10827 | ||||||||
| NCBI | gene | 188309 | |||||||
| RefSeq | protein | NM_001027157.5 | |||||||
| NM_001381511.3 | |||||||||
| SwissProt | UniProtAcc | P45961 | |||||||
| TREEFAM | TREEFAM_ID | TF315183 | |||||||
| UniProt_GCRP | UniProtAcc | P45961 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 15 Jun 2004 09:41:45 | WBPerson1971 | Event | Created | |||
| 2 | 16 Jul 2004 14:54:06 | WBPerson1971 | Event | Acquires_merge | WBGene00011632 | ||||
| Acquires_merge | WBGene00011632 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cex | ||||||||
| Allele (34) | |||||||||
| Strain | WBStrain00001820 | ||||||||
| WBStrain00001821 | |||||||||
| WBStrain00032775 | |||||||||
| WBStrain00051758 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00046140 | ||||||||
| Ortholog (26) | |||||||||
| Paralog | WBGene00016965 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00017240 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00019760 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00023407 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| Structured_description | Automated_description | Predicted to enable metal ion binding activity. Expressed in head and tail. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T09A5.1a | |||||||
| T09A5.1b | |||||||||
| Corresponding_CDS_history | T09A5.1:wp111 | ||||||||
| T09A5.1a:wp184 | |||||||||
| T09A5.1b:wp184 | |||||||||
| Corresponding_transcript | T09A5.1a.1 | ||||||||
| T09A5.1b.1 | |||||||||
| Other_sequence | CBC04518_1 | ||||||||
| Acan_isotig17164 | |||||||||
| EV852753.1 | |||||||||
| AE00658 | |||||||||
| DVC00671_1 | |||||||||
| AYC01425_1 | |||||||||
| CJC00197_1 | |||||||||
| Associated_feature | WBsf650273 | ||||||||
| WBsf665253 | |||||||||
| WBsf988575 | |||||||||
| WBsf988576 | |||||||||
| WBsf1012608 | |||||||||
| WBsf223399 | |||||||||
| WBsf223400 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00035371 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018484 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052914 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1560 | ||||||||
| Expr6646 | |||||||||
| Expr6647 | |||||||||
| Expr1023673 | |||||||||
| Expr1156516 | |||||||||
| Expr2009930 | |||||||||
| Expr2028170 | |||||||||
| Drives_construct | WBCnstr00002616 | ||||||||
| WBCnstr00002617 | |||||||||
| WBCnstr00023883 | |||||||||
| Construct_product | WBCnstr00023883 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (160) | |||||||||
| Interaction (66) | |||||||||
| Map_info | Map | II | Position | 0.576926 | Error | 0.000619 | |||
| Positive | Positive_clone | T09A5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00044578 | ||||||||
| WBPaper00060121 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
