WormBase Tree Display for Gene: WBGene00023408
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WBGene00023408 | SMap | S_parent | Sequence | T09A5 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | cex-2 | Person_evidence | WBPerson51 | |||
Sequence_name | T09A5.1 | ||||||
Molecular_name | T09A5.1a | ||||||
T09A5.1a.1 | |||||||
CE41840 | |||||||
T09A5.1b | |||||||
CE41841 | |||||||
T09A5.1b.1 | |||||||
Other_name | CELE_T09A5.1 | Accession_evidence | NDB | BX284602 | |||
Public_name | cex-2 | ||||||
DB_info | Database | AceView | gene | 2I120 | |||
WormQTL | gene | WBGene00023408 | |||||
WormFlux | gene | WBGene00023408 | |||||
NDB | locus_tag | CELE_T09A5.1 | |||||
Panther | gene | CAEEL|WormBase=WBGene00023408|UniProtKB=P45961 | |||||
family | PTHR10827 | ||||||
NCBI | gene | 188309 | |||||
RefSeq | protein | NM_001027157.5 | |||||
NM_001381511.3 | |||||||
SwissProt | UniProtAcc | P45961 | |||||
TREEFAM | TREEFAM_ID | TF315183 | |||||
UniProt_GCRP | UniProtAcc | P45961 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Acquires_merge | WBGene00011632 | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | cex | ||||||
Allele (34) | |||||||
Strain | WBStrain00001820 | ||||||
WBStrain00001821 | |||||||
WBStrain00032775 | |||||||
WBStrain00051758 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00046140 | ||||||
Ortholog (26) | |||||||
Paralog | WBGene00016965 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00017240 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00019760 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00023407 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
Structured_description | Automated_description | Predicted to enable metal ion binding activity. Expressed in head and tail. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T09A5.1a | |||||
T09A5.1b | |||||||
Corresponding_CDS_history | T09A5.1:wp111 | ||||||
T09A5.1a:wp184 | |||||||
T09A5.1b:wp184 | |||||||
Corresponding_transcript | T09A5.1a.1 | ||||||
T09A5.1b.1 | |||||||
Other_sequence | CBC04518_1 | ||||||
Acan_isotig17164 | |||||||
EV852753.1 | |||||||
AE00658 | |||||||
DVC00671_1 | |||||||
AYC01425_1 | |||||||
CJC00197_1 | |||||||
Associated_feature | WBsf650273 | ||||||
WBsf665253 | |||||||
WBsf988575 | |||||||
WBsf988576 | |||||||
WBsf1012608 | |||||||
WBsf223399 | |||||||
WBsf223400 | |||||||
Experimental_info | RNAi_result | WBRNAi00035371 | Inferred_automatically | RNAi_primary | |||
WBRNAi00018484 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00052914 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Chronogram1560 | ||||||
Expr6646 | |||||||
Expr6647 | |||||||
Expr1023673 | |||||||
Expr1156516 | |||||||
Expr2009930 | |||||||
Expr2028170 | |||||||
Drives_construct | WBCnstr00002616 | ||||||
WBCnstr00002617 | |||||||
WBCnstr00023883 | |||||||
Construct_product | WBCnstr00023883 | ||||||
Microarray_results (23) | |||||||
Expression_cluster (160) | |||||||
Interaction (66) | |||||||
Map_info | Map | II | Position | 0.576926 | Error | 0.000619 | |
Positive | Positive_clone | T09A5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00044578 | ||||||
WBPaper00060121 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |