WormBase Tree Display for Gene: WBGene00017240
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WBGene00017240 | SMap | S_parent | Sequence | F08B6 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | calu-2 | Person_evidence | WBPerson260 | |||||
Sequence_name | F08B6.3 | ||||||||
Molecular_name | F08B6.3 | ||||||||
F08B6.3.1 | |||||||||
CE48191 | |||||||||
Other_name | CELE_F08B6.3 | Accession_evidence | NDB | BX284601 | |||||
Public_name | calu-2 | ||||||||
DB_info | Database | AceView | gene | 1H336 | |||||
WormQTL | gene | WBGene00017240 | |||||||
WormFlux | gene | WBGene00017240 | |||||||
NDB | locus_tag | CELE_F08B6.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00017240|UniProtKB=Q9TYS8 | |||||||
family | PTHR10827 | ||||||||
NCBI | gene | 184174 | |||||||
RefSeq | protein | NM_059535.4 | |||||||
TrEMBL | UniProtAcc | Q9TYS8 | |||||||
UniProt_GCRP | UniProtAcc | Q9TYS8 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 09 Mar 2012 14:04:45 | WBPerson2970 | Name_change | CGC_name | calu-2 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | calu | ||||||||
Allele (21) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00097597 | ||||||||
00097598 | |||||||||
00122669 | |||||||||
Ortholog (35) | |||||||||
Paralog | WBGene00016965 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00019760 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00023408 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00023407 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to enable calcium ion binding activity. Predicted to be located in endoplasmic reticulum. Expressed in body wall musculature; neurons; and pharynx. Is an ortholog of human RCN2 (reticulocalbin 2). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F08B6.3 | |||||||
Corresponding_CDS_history | F08B6.3:wp102 | ||||||||
F08B6.3:wp236 | |||||||||
Corresponding_transcript | F08B6.3.1 | ||||||||
Other_sequence (20) | |||||||||
Associated_feature | WBsf649257 | ||||||||
WBsf219633 | |||||||||
WBsf219634 | |||||||||
Experimental_info | RNAi_result | WBRNAi00030636 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00043975 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr7970 | ||||||||
Expr1015939 | |||||||||
Expr1037402 | |||||||||
Expr1147949 | |||||||||
Expr2009711 | |||||||||
Expr2027950 | |||||||||
Drives_construct | WBCnstr00013034 | ||||||||
WBCnstr00027461 | |||||||||
Construct_product | WBCnstr00027461 | ||||||||
Microarray_results (16) | |||||||||
Expression_cluster (58) | |||||||||
Interaction | WBInteraction000329339 | ||||||||
WBInteraction000367633 | |||||||||
WBInteraction000376858 | |||||||||
WBInteraction000421886 | |||||||||
WBInteraction000521524 | |||||||||
WBInteraction000573845 | |||||||||
Map_info | Map | I | Position | 1.31141 | |||||
Positive | Positive_clone | F08B6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00031532 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |