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WormBase Tree Display for Gene: WBGene00017240

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Name Class

WBGene00017240SMapS_parentSequenceF08B6
IdentityVersion2
NameCGC_namecalu-2Person_evidenceWBPerson260
Sequence_nameF08B6.3
Molecular_nameF08B6.3
F08B6.3.1
CE48191
Other_nameCELE_F08B6.3Accession_evidenceNDBBX284601
Public_namecalu-2
DB_infoDatabaseAceViewgene1H336
WormQTLgeneWBGene00017240
WormFluxgeneWBGene00017240
NDBlocus_tagCELE_F08B6.3
PanthergeneCAEEL|WormBase=WBGene00017240|UniProtKB=Q9TYS8
familyPTHR10827
NCBIgene184174
RefSeqproteinNM_059535.4
TrEMBLUniProtAccQ9TYS8
UniProt_GCRPUniProtAccQ9TYS8
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:58WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
209 Mar 2012 14:04:45WBPerson2970Name_changeCGC_namecalu-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcalu
Allele (21)
RNASeq_FPKM (74)
GO_annotation00097597
00097598
00122669
Ortholog (35)
ParalogWBGene00016965Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00019760Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00023408Caenorhabditis elegansFrom_analysisPanther
WBGene00023407Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity. Predicted to be located in endoplasmic reticulum. Expressed in body wall musculature; neurons; and pharynx. Is an ortholog of human RCN2 (reticulocalbin 2).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF08B6.3
Corresponding_CDS_historyF08B6.3:wp102
F08B6.3:wp236
Corresponding_transcriptF08B6.3.1
Other_sequence (20)
Associated_featureWBsf649257
WBsf219633
WBsf219634
Experimental_infoRNAi_resultWBRNAi00030636Inferred_automaticallyRNAi_primary
WBRNAi00043975Inferred_automaticallyRNAi_primary
Expr_patternExpr7970
Expr1015939
Expr1037402
Expr1147949
Expr2009711
Expr2027950
Drives_constructWBCnstr00013034
WBCnstr00027461
Construct_productWBCnstr00027461
Microarray_results (16)
Expression_cluster (58)
InteractionWBInteraction000329339
WBInteraction000367633
WBInteraction000376858
WBInteraction000421886
WBInteraction000521524
WBInteraction000573845
Map_infoMapIPosition1.31141
PositivePositive_cloneF08B6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00031532
WBPaper00038491
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene