WormBase Tree Display for Gene: WBGene00016965
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| WBGene00016965 | SMap | S_parent | Sequence | C56C10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C56C10.9 | |||||||
| Molecular_name | C56C10.9 | ||||||||
| C56C10.9.1 | |||||||||
| CE02574 | |||||||||
| Other_name | CELE_C56C10.9 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | C56C10.9 | ||||||||
| DB_info | Database | AceView | gene | 2G880 | |||||
| WormQTL | gene | WBGene00016965 | |||||||
| WormFlux | gene | WBGene00016965 | |||||||
| NDB | locus_tag | CELE_C56C10.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016965|UniProtKB=Q18887 | |||||||
| family | PTHR10827 | ||||||||
| NCBI | gene | 183859 | |||||||
| RefSeq | protein | NM_062937.8 | |||||||
| TrEMBL | UniProtAcc | Q18887 | |||||||
| UniProt_GCRP | UniProtAcc | Q18887 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:58 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (15) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00062693 | ||||||||
| 00062694 | |||||||||
| 00062695 | |||||||||
| 00062696 | |||||||||
| 00062697 | |||||||||
| 00122468 | |||||||||
| Contained_in_operon | CEOP2256 | ||||||||
| Ortholog (28) | |||||||||
| Paralog | WBGene00023408 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00023407 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00017240 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00019760 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable calcium ion binding activity. Predicted to be involved in calcium-ion regulated exocytosis. Predicted to be located in endoplasmic reticulum. Is an ortholog of human SDF4 (stromal cell derived factor 4). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C56C10.9 | |||||||
| Corresponding_transcript | C56C10.9.1 | ||||||||
| Other_sequence | CR01944 | ||||||||
| CBC01326_2 | |||||||||
| CRC04783_1 | |||||||||
| CJC02815_1 | |||||||||
| CBC02641_1 | |||||||||
| Associated_feature | WBsf665627 | ||||||||
| WBsf665628 | |||||||||
| WBsf665629 | |||||||||
| WBsf223210 | |||||||||
| WBsf223211 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00062174 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00030201 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043271 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012461 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014397 | ||||||||
| Expr1037279 | |||||||||
| Expr1147250 | |||||||||
| Expr2001976 | |||||||||
| Expr2020200 | |||||||||
| Drives_construct | WBCnstr00027672 | ||||||||
| Construct_product | WBCnstr00027672 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (93) | |||||||||
| Interaction (38) | |||||||||
| Map_info | Positive | Positive_clone | C56C10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -0.101407 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
