WormBase Tree Display for Gene: WBGene00023408

WBGene00023408 SMap: S_parent: Sequence: T09A5
  Identity: Version: 2
    Name: CGC_name: cex-2 Person_evidence: WBPerson51
      Sequence_name: T09A5.1
      Molecular_name: T09A5.1a
        T09A5.1a.1
        CE41840
        T09A5.1b
        CE41841
        T09A5.1b.1
      Other_name: CELE_T09A5.1 Accession_evidence: NDB BX284602
      Public_name: cex-2
    DB_info: Database: AceView gene 2I120
        WormQTL gene WBGene00023408
        WormFlux gene WBGene00023408
        NDB locus_tag CELE_T09A5.1
        Panther gene CAEEL|WormBase=WBGene00023408|UniProtKB=P45961
          family PTHR10827
        NCBI gene 188309
        RefSeq protein NM_001027157.5
            NM_001381511.3
        SwissProt UniProtAcc P45961
        TREEFAM TREEFAM_ID TF315183
        UniProt_GCRP UniProtAcc P45961
    Species: Caenorhabditis elegans
    History: Version_change: 1 15 Jun 2004 09:41:45 WBPerson1971 Event: Created
        2 16 Jul 2004 14:54:06 WBPerson1971 Event: Acquires_merge: WBGene00011632
      Acquires_merge: WBGene00011632
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cex
    Allele (34)
    Strain: WBStrain00001820
      WBStrain00001821
      WBStrain00032775
      WBStrain00051758
    RNASeq_FPKM (74)
    GO_annotation: 00046140
    Ortholog: WBGene00033801 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            Inparanoid_8
            WormBase-Compara
      WBGene00057694 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00157662 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
      WBGene00142583 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
      CSP21.g6864 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g9317 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g14629 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g20130 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP32.g4441 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g180 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g18794 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g17092 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00001.g142 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_00882.g14733 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-cex-2 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold504.g2403 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00159.g5928 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_06950 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_005701 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g1366 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_20145800 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g5107 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00204576 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00267682 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00288534 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0020907 Drosophila melanogaster From_analysis: Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00016965 Caenorhabditis elegans From_analysis: Panther
      WBGene00017240 Caenorhabditis elegans From_analysis: Panther
      WBGene00019760 Caenorhabditis elegans From_analysis: Panther
      WBGene00023407 Caenorhabditis elegans From_analysis: TreeFam
            Panther
    Structured_description: Automated_description: Predicted to enable metal ion binding activity. Expressed in head and tail. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T09A5.1a
      T09A5.1b
    Corresponding_CDS_history: T09A5.1:wp111
      T09A5.1a:wp184
      T09A5.1b:wp184
    Corresponding_transcript: T09A5.1a.1
      T09A5.1b.1
    Other_sequence: CBC04518_1
      Acan_isotig17164
      EV852753.1
      AE00658
      DVC00671_1
      AYC01425_1
      CJC00197_1
    Associated_feature: WBsf650273
      WBsf665253
      WBsf988575
      WBsf988576
      WBsf1012608
      WBsf223399
      WBsf223400
  Experimental_info: RNAi_result: WBRNAi00035371 Inferred_automatically: RNAi_primary
      WBRNAi00018484 Inferred_automatically: RNAi_primary
      WBRNAi00052914 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram1560
      Expr6646
      Expr6647
      Expr1023673
      Expr1156516
      Expr2009930
      Expr2028170
    Drives_construct: WBCnstr00002616
      WBCnstr00002617
      WBCnstr00023883
    Construct_product: WBCnstr00023883
    Microarray_results (23)
    Expression_cluster (160)
    Interaction (66)
  Map_info: Map: II Position: 0.576926 Error: 0.000619
    Positive: Positive_clone: T09A5 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00044578
    WBPaper00060121
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene