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WormBase Tree Display for Gene: WBGene00021984

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Name Class

WBGene00021984SMapS_parentSequenceY59C2A
IdentityVersion1
NameSequence_nameY59C2A.1
Molecular_nameY59C2A.1
Y59C2A.1.1
CE31658
Other_nameCELE_Y59C2A.1Accession_evidenceNDBBX284602
Public_nameY59C2A.1
DB_infoDatabaseAceViewgene2C501
WormQTLgeneWBGene00021984
WormFluxgeneWBGene00021984
NDBlocus_tagCELE_Y59C2A.1
PanthergeneCAEEL|WormBase=WBGene00021984|UniProtKB=Q9TZC6
familyPTHR11705
NCBIgene173577
RefSeqproteinNM_061812.7
TrEMBLUniProtAccQ9TZC6
UniProt_GCRPUniProtAccQ9TZC6
OMIMgene609562
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:05WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (149)
RNASeq_FPKM (74)
GO_annotation (12)
Ortholog (38)
ParalogWBGene00008521Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011235Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00012168Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00013895Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020281Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00020283Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00021213Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00021645Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00004747Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable metallocarboxypeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in extracellular space. Human ortholog(s) of this gene implicated in familial febrile seizures 11 and familial temporal lobe epilepsy 5. Is an ortholog of human CPA6 (carboxypeptidase A6).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0060752Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:17245)
DOID:0111308Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:17245)
Molecular_infoCorresponding_CDSY59C2A.1
Corresponding_CDS_historyY59C2A.1:wp82
Corresponding_transcriptY59C2A.1.1
Other_sequence (22)
Associated_featureWBsf986909
WBsf1011690
WBsf220909
WBsf220910
Experimental_infoRNAi_resultWBRNAi00089205Inferred_automaticallyRNAi_primary
WBRNAi00037632Inferred_automaticallyRNAi_primary
WBRNAi00057762Inferred_automaticallyRNAi_primary
WBRNAi00001938Inferred_automaticallyRNAi_primary
WBRNAi00021166Inferred_automaticallyRNAi_primary
WBRNAi00103622Inferred_automaticallyRNAi_primary
Expr_patternExpr1011136
Expr1039668
Expr1161185
Expr2008096
Expr2026334
Microarray_results (19)
Expression_clusterWBPaper00032031:DConiospora_downregulated_cDNA_24h
WBPaper00035269:cde-1_regulated
WBPaper00037950:bodywall-muscle_embryo_enriched
WBPaper00037950:bodywall-muscle_embryo_SelectivelyEnriched
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00040560:hpl-2_L3_downregulated
WBPaper00044736:oscillating_dev_expression
WBPaper00045417:128Q-huntingtin_upreglated
WBPaper00045521:Gender_Neutral
WBPaper00045571:germline-ablation_upregulated
WBPaper00045861:set-2(ok952)_upregulated
WBPaper00045861:wdr-5(ok1417)_upregulated
WBPaper00046499:AMPK_regulated
WBPaper00046805:csr-1(RNAi)_upregulated_Set1
WBPaper00047132:glp-1(ts)-25C_upregulated
WBPaper00048988:neuron_expressed
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049942:HeatShock_upregulated_hsf-1(+)
WBPaper00050080:rbr-2(tm3141)_upregulated
WBPaper00050496:unc-39(hp701)_regulated
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00051404:alg-2(ok304)_upregulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053295:lin-22(ot269)_downregulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053599:mitosis_vs_meiosis_upregulated
WBPaper00053599:oocyte_vs_mitosis_upregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Psora_downregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rapamycin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055354:Rifampicin-Psora_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055482:pmt-2(RNAi)_upregulated
WBPaper00055648:anterior-head_expressed
WBPaper00055648:male-tail_expressed
WBPaper00055648:vulva-uterus_expressed
WBPaper00055897:heat-shock_upregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_upregulated_N2
WBPaper00056139:soil-microbiota_upregulated
WBPaper00056290:mdt-15(mg584)_downregulated
WBPaper00056471:S.aureus-4h_upregulated_N2
WBPaper00056826:hmc_biased
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057140:meg-3(tm4259)_meg-4(ax2026)_downregulated
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058691:cfp-1(tm6369)_upregulated
WBPaper00058691:set-2(bn129)_upregulated
WBPaper00058711:paraquat_downregulated
WBPaper00058948:PA14_downregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060634:unc-120(st364)_downregulated
WBPaper00060683:hlh-11(ko1)_upregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061274:microgravity_downregulated
WBPaper00061340:AVA
WBPaper00061340:AVD
WBPaper00061340:AVJ
WBPaper00061340:GLR
WBPaper00061340:hmc
WBPaper00061340:hmc_homolog
WBPaper00061340:I5
WBPaper00061340:mu_int_mu_anal
WBPaper00061340:mu_sph
WBPaper00061340:RIB
WBPaper00061340:RID
WBPaper00061340:RME
WBPaper00061340:SIA
WBPaper00061341:28C_24h_upregulated
WBPaper00061341:28C_48h_upregulated
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061479:mep-1(ne4629)_upregulated
WBPaper00061479:ubc-9(ne4833)_upregulated
WBPaper00061527:ccg-1_12351-ZC410.5
WBPaper00061651:Distal_tip_cell_enriched
WBPaper00061651:hmc_enriched
WBPaper00061651:PVW_enriched
WBPaper00061651:RIA_enriched
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00064005:starvation_upregulated_aptf-1(gk794)_mRNA
WBPaper00064005:starvation_upregulated_N2_mRNA
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064156:lipl-4(overexpress)_upregulated
WBPaper00064306:Agaro-oligosaccharides_upregulated
WBPaper00064494:postdauer_downregulated_WholeAnimal
WBPaper00064532:pals-25(icb98)_upregulated
WBPaper00064716:paraquat_downregulated
WBPaper00064933:bcf-1(ylf1)_downregulated_transcript
WBPaper00065623:58
WBPaper00065841:4_2
WBPaper00065841:7_0
WBPaper00065841:7_1
WBPaper00065841:7_2
WBPaper00065841:7_3
WBPaper00065841:7_4
WBPaper00065841:23_0
WBPaper00065841:38_0
WBPaper00065841:38_1
WBPaper00065841:38_2
WBPaper00065841:38_3
WBPaper00065841:75_0
WBPaper00065841:83_0
WBPaper00065841:102_0
WBPaper00065841:110_0
WBPaper00065841:110_1
WBPaper00065841:143_0
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
cgc4489_group_18
WBPaper00024393:strongly_regulated_dauer_genes
WBPaper00025141:N2_Expressed_Genes
WBPaper00030985:Photorhabdus_luminescens_downregulated
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:total_muscle_depleted
WBPaper00031252:AIN-1_IP_enriched
WBPaper00035084:embryo_enriched_AIN-2_IP
WBPaper00035084:L4_enriched_AIN-2_IP
WBPaper00036286:Pattern_I
WBPaper00037147:heatshock_downregulated
WBPaper00037695:LD_3-day
WBPaper00040210:Diazinon_24C_regulated
WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00041002:HF_3d_2.0mM_Up
WBPaper00041002:HQ_3d_2.0mM_Up
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041960:N2_fasting_upregulated_anytime
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00045673:colistin_upregulated
WBPaper00045960:L1-L4-lethargus_upregulated
WBPaper00045960:L4-lethargus_upregulated
WBPaper00047070:N2_starvation_upregulated
WBPaper00055899:nitroguanidine_regulated
InteractionWBInteraction000212158
Map_infoPositivePositive_cloneY59C2AInferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII-13.84
ReferenceWBPaper00038491
WBPaper00055090
WBPaper00065331
MethodGene