WormBase Tree Display for Gene: WBGene00020283
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| WBGene00020283 | SMap | S_parent | Sequence | T06A4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T06A4.3 | |||||||
| Molecular_name | T06A4.3a | ||||||||
| T06A4.3a.1 | |||||||||
| CE37044 | |||||||||
| T06A4.3b | |||||||||
| CE37045 | |||||||||
| T06A4.3b.1 | |||||||||
| Other_name | CELE_T06A4.3 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | T06A4.3 | ||||||||
| DB_info | Database | AceView | gene | 1B243 | |||||
| WormQTL | gene | WBGene00020283 | |||||||
| WormFlux | gene | WBGene00020283 | |||||||
| NDB | locus_tag | CELE_T06A4.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020283|UniProtKB=Q6A577 | |||||||
| family | PTHR11705 | ||||||||
| NCBI | gene | 171668 | |||||||
| RefSeq | protein | NM_001026441.4 | |||||||
| NM_001026440.5 | |||||||||
| TrEMBL | UniProtAcc | Q6A576 | |||||||
| Q6A577 | |||||||||
| UniProt_GCRP | UniProtAcc | Q6A577 | |||||||
| OMIM | gene | 609562 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (127) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (53) | |||||||||
| Paralog | WBGene00008521 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00011235 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00012168 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00013895 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020281 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021213 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021645 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021984 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00004747 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable metallocarboxypeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in extracellular space. Human ortholog(s) of this gene implicated in familial febrile seizures 11 and familial temporal lobe epilepsy 5. Is an ortholog of human CPA6 (carboxypeptidase A6). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0060752 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17245) | ||||
| DOID:0111308 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17245) | ||||||
| Molecular_info | Corresponding_CDS | T06A4.3a | |||||||
| T06A4.3b | |||||||||
| Corresponding_CDS_history | T06A4.3:wp126 | ||||||||
| Corresponding_transcript | T06A4.3a.1 | ||||||||
| T06A4.3b.1 | |||||||||
| Other_sequence (27) | |||||||||
| Associated_feature (15) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00004148 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00035250 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052614 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024626 | ||||||||
| Expr1038833 | |||||||||
| Expr1156220 | |||||||||
| Expr2005918 | |||||||||
| Expr2024134 | |||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (190) | |||||||||
| Interaction (174) | |||||||||
| Map_info | Positive | Positive_clone | T06A4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | -18.2766 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
