WormBase Tree Display for Gene: WBGene00020281
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| WBGene00020281 | SMap | S_parent | Sequence | T06A4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T06A4.1 | |||||||
| Molecular_name | T06A4.1a | ||||||||
| T06A4.1a.1 | |||||||||
| CE52652 | |||||||||
| T06A4.1b | |||||||||
| CE33169 | |||||||||
| T06A4.1a.2 | |||||||||
| T06A4.1b.1 | |||||||||
| Other_name | CELE_T06A4.1 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | T06A4.1 | ||||||||
| DB_info | Database | AceView | gene | 1B249 | |||||
| WormQTL | gene | WBGene00020281 | |||||||
| WormFlux | gene | WBGene00020281 | |||||||
| NDB | locus_tag | CELE_T06A4.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020281|UniProtKB=H2L0K5 | |||||||
| family | PTHR11705 | ||||||||
| NCBI | gene | 171669 | |||||||
| RefSeq | protein | NM_182009.5 | |||||||
| NM_001392492.1 | |||||||||
| TrEMBL | UniProtAcc | H2L0K5 | |||||||
| Q9TZH1 | |||||||||
| UniProt_GCRP | UniProtAcc | H2L0K5 | |||||||
| OMIM | gene | 609562 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (102) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (65) | |||||||||
| Paralog | WBGene00008521 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00011235 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00012168 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00013895 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021213 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021645 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020283 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021984 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00004747 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable metallocarboxypeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in extracellular space. Human ortholog(s) of this gene implicated in several diseases, including Behcet's disease; familial febrile seizures 11; and familial temporal lobe epilepsy 5. Is an ortholog of human CPA6 (carboxypeptidase A6). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:9351 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2300) | ||||
| DOID:9352 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2300) | ||||||
| DOID:1184 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2300) | ||||||
| DOID:2228 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2300) | ||||||
| DOID:9970 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2300) | ||||||
| DOID:13241 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2300) | ||||||
| DOID:0060752 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17245) | ||||||
| DOID:784 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2300) | ||||||
| DOID:0111308 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17245) | ||||||
| Molecular_info | Corresponding_CDS | T06A4.1a | |||||||
| T06A4.1b | |||||||||
| Corresponding_CDS_history | T06A4.1a:wp142 | ||||||||
| T06A4.1a:wp265 | |||||||||
| Corresponding_transcript | T06A4.1a.1 | ||||||||
| T06A4.1a.2 | |||||||||
| T06A4.1b.1 | |||||||||
| Other_sequence (21) | |||||||||
| Associated_feature (18) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00004146 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00089150 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052612 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022402 | ||||||||
| Expr1038832 | |||||||||
| Expr1156218 | |||||||||
| Expr2005917 | |||||||||
| Expr2024133 | |||||||||
| Drives_construct | WBCnstr00025243 | ||||||||
| Construct_product | WBCnstr00025243 | ||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (168) | |||||||||
| Interaction (15) | |||||||||
| Map_info | Positive | Positive_clone | T06A4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | -18.2648 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
