WormBase Tree Display for Gene: WBGene00020281

WBGene00020281 SMap: S_parent: Sequence: T06A4
  Identity: Version: 1
    Name: Sequence_name: T06A4.1
      Molecular_name: T06A4.1a
        T06A4.1a.1
        CE52652
        T06A4.1b
        CE33169
        T06A4.1a.2
        T06A4.1b.1
      Other_name: CELE_T06A4.1 Accession_evidence: NDB BX284601
      Public_name: T06A4.1
    DB_info: Database: AceView gene 1B249
        WormQTL gene WBGene00020281
        WormFlux gene WBGene00020281
        NDB locus_tag CELE_T06A4.1
        Panther gene CAEEL|WormBase=WBGene00020281|UniProtKB=H2L0K5
          family PTHR11705
        NCBI gene 171669
        RefSeq protein NM_182009.5
            NM_001392492.1
        TrEMBL UniProtAcc H2L0K5
            Q9TZH1
        UniProt_GCRP UniProtAcc H2L0K5
        OMIM gene 609562
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:02 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (102)
    RNASeq_FPKM (74)
    GO_annotation (12)
    Ortholog: WBGene00060957 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00138913 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
      WBGene00155344 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00126381 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
      WBGene00117397 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00037950 Caenorhabditis briggsae From_analysis: Hillier-set
            WormBase-Compara
      CBOVI.g9743 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g395 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g2816 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP31.g5682 Caenorhabditis uteleia From_analysis: WormBase-Compara
      Cang_2012_03_13_00909.g14884 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_02587.g17337 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-T06A4.1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_I.g368 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g8629 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp11.Scaffold629.g8630 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_02350.g26106 Caenorhabditis sinica From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g05804 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g20726 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10229110 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g123 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00259788 Strongyloides ratti From_analysis: WormBase-Compara
      SGD:S000001174 Saccharomyces cerevisiae From_analysis: OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      FB:FBgn0031929 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      FB:FBgn0031930 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      FB:FBgn0032143 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      FB:FBgn0032144 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      FB:FBgn0033241 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      FB:FBgn0033774 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
      FB:FBgn0035718 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      FB:FBgn0035781 Drosophila melanogaster From_analysis: Hieranoid
            Inparanoid
            Panther
      FB:FBgn0039073 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      ZFIN:ZDB-GENE-020514-1 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
      ZFIN:ZDB-GENE-030131-1132 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      ZFIN:ZDB-GENE-050522-438 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            OMA
            OrthoFinder
            OrthoInspector
      ZFIN:ZDB-GENE-040704-61 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
      ZFIN:ZDB-GENE-040801-182 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            OMA
            OrthoFinder
            OrthoInspector
      ZFIN:ZDB-GENE-050522-259 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      ZFIN:ZDB-GENE-091204-331 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      ZFIN:ZDB-GENE-070619-6 Danio rerio From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
      HGNC:2296 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            SonicParanoid
      HGNC:2297 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            SonicParanoid
      HGNC:2298 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            OMA
            OrthoFinder
            OrthoInspector
      HGNC:2299 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            SonicParanoid
      HGNC:2300 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
      HGNC:15740 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      HGNC:17245 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      HGNC:15722 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            SonicParanoid
      HGNC:21011 Homo sapiens From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
      MGI:88479 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
            OrthoInspector
      MGI:1891837 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            OMA
            OrthoFinder
            OrthoInspector
      MGI:1919041 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      MGI:1921899 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      MGI:1923953 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      MGI:88478 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      MGI:3617840 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      MGI:3045348 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      RGD:2388 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      RGD:2391 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      RGD:2390 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
      RGD:71035 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
      RGD:1305563 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      RGD:1311764 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
            Panther
      RGD:1303098 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
      RGD:1563619 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            SonicParanoid
    Paralog: WBGene00008521 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00011235 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00012168 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00013895 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00021213 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00021645 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00020283 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00021984 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00004747 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable metallocarboxypeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in extracellular space. Human ortholog(s) of this gene implicated in several diseases, including Behcet's disease; familial febrile seizures 11; and familial temporal lobe epilepsy 5. Is an ortholog of human CPA6 (carboxypeptidase A6). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:9351 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:2300)
      DOID:9352 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:2300)
      DOID:1184 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:2300)
      DOID:2228 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:2300)
      DOID:9970 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:2300)
      DOID:13241 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:2300)
      DOID:0060752 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:17245)
      DOID:784 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:2300)
      DOID:0111308 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:17245)
  Molecular_info: Corresponding_CDS: T06A4.1a
      T06A4.1b
    Corresponding_CDS_history: T06A4.1a:wp142
      T06A4.1a:wp265
    Corresponding_transcript: T06A4.1a.1
      T06A4.1a.2
      T06A4.1b.1
    Other_sequence (21)
    Associated_feature (18)
  Experimental_info: RNAi_result: WBRNAi00004146 Inferred_automatically: RNAi_primary
      WBRNAi00089150 Inferred_automatically: RNAi_primary
      WBRNAi00052612 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1022402
      Expr1038832
      Expr1156218
      Expr2005917
      Expr2024133
    Drives_construct: WBCnstr00025243
    Construct_product: WBCnstr00025243
    Microarray_results (24)
    Expression_cluster (168)
    Interaction (15)
  Map_info: Positive: Positive_clone: T06A4 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I -18.2648
  Reference: WBPaper00038491
    WBPaper00055090
  Method: Gene