WormBase Tree Display for Expression_cluster: WBPaper00037147:heatshock_downregulated
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WBPaper00037147:heatshock_downregulated | Description | Genes for which heat shock F3 (fraction 3, containing heavy polysomes) versus control F3 is significantly decreased | |
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Species | Caenorhabditis elegans | ||
Algorithm | Survival during heat stress was analyzed using a non-parametric (Mantel-Haenszel) Log rank test and presented as Kaplan-Meier survival curves (Prism software package). For the TSA analysis all full genome wide expression analyses involved comparisons of two groups and thus on a gene by gene basis, for each set, authors performed two-sample t-tests on the log2 transformed expression measures to derive raw p-values. The Benjamini and Hochberg was then used to report the inference adjusted for multiple comparisons (q-values), in their case controlling false discovery rate (FDR). Statistically significant differential expression was defined as FDR q-value <= 0.05, thereby controlling FDR at <= 0.05 for each set of comparisons. Shown here are heat shock vs control ratio and raw p_value based on two-sample t-test. | ||
Reference | WBPaper00037147 | ||
Microarray_results (68) | |||
Gene (63) | |||
Attribute_of | Microarray_experiment (24) | ||
Regulation | Regulated_by_treatment | heat shock | |
Associated_with | Life_stage | WBls:0000057 | |
Remark | Type: Response to Temperature Stimulus - Heat |