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WormBase Tree Display for Expression_cluster: WBPaper00037147:heatshock_downregulated

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Name Class

WBPaper00037147:heatshock_downregulatedDescriptionGenes for which heat shock F3 (fraction 3, containing heavy polysomes) versus control F3 is significantly decreased
SpeciesCaenorhabditis elegans
AlgorithmSurvival during heat stress was analyzed using a non-parametric (Mantel-Haenszel) Log rank test and presented as Kaplan-Meier survival curves (Prism software package). For the TSA analysis all full genome wide expression analyses involved comparisons of two groups and thus on a gene by gene basis, for each set, authors performed two-sample t-tests on the log2 transformed expression measures to derive raw p-values. The Benjamini and Hochberg was then used to report the inference adjusted for multiple comparisons (q-values), in their case controlling false discovery rate (FDR). Statistically significant differential expression was defined as FDR q-value <= 0.05, thereby controlling FDR at <= 0.05 for each set of comparisons. Shown here are heat shock vs control ratio and raw p_value based on two-sample t-test.
ReferenceWBPaper00037147
Microarray_results (68)
Gene (63)
Attribute_ofMicroarray_experiment (24)
RegulationRegulated_by_treatmentheat shock
Associated_withLife_stageWBls:0000057
RemarkType: Response to Temperature Stimulus - Heat